RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ACTN4O43707 911 aaKnown RBP12.38□□□□□ -0.43
PBRM1-201ENST00000296302 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
PBRM1-201ENST00000296302 CABS1Q96KC9 395 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 XPO4Q9C0E2 1151 aaKnown RBP12.38□□□□□ -0.43
PBRM1-201ENST00000296302 SBNO2Q9Y2G9 1366 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 DEXIO95424 95 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 GNA11P29992 359 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 NOX5Q96PH1 765 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 TSKSQ9UJT2 592 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 ETF1P62495 437 aaKnown RBP12.38□□□□□ -0.43
PBRM1-201ENST00000296302 PPP1R7Q15435 360 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 ERCC6LQ2NKX8 1250 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 AEBP2Q6ZN18 517 aaPredicted RBP12.38□□□□□ -0.43
PBRM1-201ENST00000296302 GPT2Q8TD30 523 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 KRT9P35527 623 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
PBRM1-201ENST00000296302 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 PAK1Q13153 545 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 CEP128Q6ZU80 1094 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 ATP6V0A2Q9Y487 856 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 NPATQ14207 1427 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 A0A1W2PP64 1363 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 MTX1Q13505 466 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 STMN2Q93045 179 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
PBRM1-201ENST00000296302 FANCAO15360 1455 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
PBRM1-201ENST00000296302 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
PBRM1-201ENST00000296302 SEL1L2Q5TEA6 688 aa12.37□□□□□ -0.43
PBRM1-201ENST00000296302 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 MAP2K2P36507 400 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 CACNA2D3Q8IZS8 1091 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 ATP8B1O43520 1251 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 G2E3Q7L622 706 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 SPATS2Q86XZ4 545 aaKnown RBP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 LRRC8AQ8IWT6 810 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 SAMM50Q9Y512 469 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 RXRAP19793 462 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 SV2BQ7L1I2 683 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 ANGEL1Q9UNK9 670 aaKnown RBP12.36□□□□□ -0.43
PBRM1-201ENST00000296302 TMEM110-MUSTN1A8MSY1 372 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 PCK1P35558 622 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 MTMR3Q13615 1198 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 ADALQ6DHV7 355 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 CFAP43Q8NDM7 1665 aa12.36□□□□□ -0.43
PBRM1-201ENST00000296302 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
PBRM1-201ENST00000296302 HOXB7P09629 217 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 GBP1P32455 592 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
PBRM1-201ENST00000296302 POSTNQ15063 836 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 RPGRQ92834 1020 aaKnown RBP12.35□□□□□ -0.43
PBRM1-201ENST00000296302 IQCDQ96DY2 449 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 UTP11Q9Y3A2 253 aaKnown RBP12.35□□□□□ -0.43
PBRM1-201ENST00000296302 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 CHL1O00533 1208 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 ZNF174Q15697 407 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 CSGALNACT2Q8N6G5 542 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 BICD1Q96G01 975 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
PBRM1-201ENST00000296302 MED4Q9NPJ6 270 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 SARNPP82979 210 aaKnown RBP12.35□□□□□ -0.43
PBRM1-201ENST00000296302 LRMPQ12912 555 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 RAPGEF1Q13905 1077 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 CFAP221Q4G0U5 840 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 WDR66Q8TBY9 1149 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
PBRM1-201ENST00000296302 GSPT1P15170 499 aaKnown RBP12.34□□□□□ -0.43
PBRM1-201ENST00000296302 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 TSNAXIP1Q2TAA8 658 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 CCDC65Q8IXS2 484 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 DIS3L2Q8IYB7 885 aaKnown RBP12.34□□□□□ -0.43
PBRM1-201ENST00000296302 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 TRAF5O00463 557 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
PBRM1-201ENST00000296302 MAGEA1P43355 309 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 PDE4DQ08499 809 aa12.34□□□□□ -0.43
PBRM1-201ENST00000296302 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms