RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 TAF1P21675 1872 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 IDH1O75874 414 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 PDE6AP16499 860 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 DNM1Q05193 864 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 CCDC173Q0VFZ6 552 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 SCRN1Q12765 414 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 TRDNQ13061 729 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 FOXD4L6Q3SYB3 417 aaPredicted RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 CCDC183Q5T5S1 534 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 PI16Q6UXB8 463 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 FOXD4L3Q6VB84 417 aaPredicted RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 RALYLQ86SE5 291 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 ANKRD18AQ8IVF6 992 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 PANK2Q9BZ23 570 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 GDPD2Q9HCC8 539 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 PIH1D3Q9NQM4 214 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 SEC31BQ9NQW1 1179 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 GNL3LQ9NVN8 582 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 NARFQ9UHQ1 456 aa10.89□□□□□ -0.67
CLRN1-201ENST00000295911 NSFL1CQ9UNZ2 370 aaKnown RBP10.89□□□□□ -0.67
CLRN1-201ENST00000295911 ZNF532Q9HCE3 1301 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 SYCE3A1L190 88 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 H3BQV1 296 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 FOXP2O15409 715 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 GADD45BO75293 160 aaPredicted RBP10.88□□□□□ -0.67
CLRN1-201ENST00000295911 ZPR1O75312 459 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 GNAT2P19087 354 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
CLRN1-201ENST00000295911 CHRNDQ07001 517 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 UBE4AQ14139 1066 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 IFFO2Q5TF58 517 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 TTLL5Q6EMB2 1281 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 NAA16Q6N069 864 aaPredicted RBP10.88□□□□□ -0.67
CLRN1-201ENST00000295911 RGS22Q8NE09 1264 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 AIDAQ96BJ3 306 aa10.88□□□□□ -0.67
CLRN1-201ENST00000295911 BSDC1Q9NW68 430 aaPredicted RBP10.88□□□□□ -0.67
CLRN1-201ENST00000295911 CCDC88AQ3V6T2 1871 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 PATL2C9JE40 543 aaKnown RBP10.87□□□□□ -0.67
CLRN1-201ENST00000295911 FIBPO43427 364 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 PRC1O43663 620 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 APPP05067 770 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
CLRN1-201ENST00000295911 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 ATL3Q6DD88 541 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 CDC37L1Q7L3B6 337 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 NSUN7Q8NE18 718 aaKnown RBP10.87□□□□□ -0.67
CLRN1-201ENST00000295911 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
CLRN1-201ENST00000295911 SETDB2Q96T68 719 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 LRRC2Q9BYS8 371 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 TSPY26PQ9H489 355 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 CFAP45Q9UL16 551 aa10.87□□□□□ -0.67
CLRN1-201ENST00000295911 JAK2O60674 1132 aa10.86□□□□□ -0.67
CLRN1-201ENST00000295911 LSM11P83369 360 aaKnown RBP eCLIP10.86□□□□□ -0.67
CLRN1-201ENST00000295911 RASGRF1Q13972 1273 aa10.86□□□□□ -0.67
CLRN1-201ENST00000295911 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
CLRN1-201ENST00000295911 MB21D2Q8IYB1 491 aaPredicted RBP10.86□□□□□ -0.67
CLRN1-201ENST00000295911 TRIM44Q96DX7 344 aaPredicted RBP10.86□□□□□ -0.67
CLRN1-201ENST00000295911 RBSNQ9H1K0 784 aa10.86□□□□□ -0.67
CLRN1-201ENST00000295911 RTCBQ9Y3I0 505 aaKnown RBP10.86□□□□□ -0.67
CLRN1-201ENST00000295911 A0A0G2JLW4 131 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 PTPDC1A2A3K4 754 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 GOLGA6L4A6NEF3 574 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 HMGB2P26583 209 aaKnown RBP10.85□□□□□ -0.67
CLRN1-201ENST00000295911 HAND2P61296 217 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 CAVIN4Q5BKX8 364 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 MEX3CQ5U5Q3 659 aaKnown RBP10.85□□□□□ -0.67
CLRN1-201ENST00000295911 TPTE2Q6XPS3 522 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 MAGEB6Q8N7X4 407 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 TMEM87BQ96K49 555 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 GJD4Q96KN9 370 aaPredicted RBP10.85□□□□□ -0.67
CLRN1-201ENST00000295911 NLRP3Q96P20 1036 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 NACAP1Q9BZK3 213 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 CCNL1Q9UK58 526 aaPredicted RBP10.85□□□□□ -0.67
CLRN1-201ENST00000295911 WWC3Q9ULE0 1092 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 NAP1L2Q9ULW6 460 aaPredicted RBP10.85□□□□□ -0.67
CLRN1-201ENST00000295911 C4AP0C0L4 1744 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 C4BP0C0L5 1744 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 ZNF804BA4D1E1 1349 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 PNPLA7Q6ZV29 1317 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 SALL1Q9NSC2 1324 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 TIAM2Q8IVF5 1701 aa10.85□□□□□ -0.67
CLRN1-201ENST00000295911 SEMA3EO15041 775 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 ONECUT3O60422 494 aaPredicted RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 BCAMP50895 628 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 CCT2P78371 535 aaKnown RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 RESTQ13127 1097 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 UVSSAQ2YD98 709 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 TBC1D9BQ66K14 1250 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 TMED8Q6PL24 325 aaPredicted RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 NBPF5PQ86XG9 351 aaPredicted RBP10.84□□□□□ -0.67
CLRN1-201ENST00000295911 OXER1Q8TDS5 423 aa10.84□□□□□ -0.67
CLRN1-201ENST00000295911 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms