RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 NDUFAB1O14561 156 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 GSCP56915 257 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 SLC30A9Q6PML9 568 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 PROSER2Q86WR7 435 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 FAM81AQ8TBF8 368 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 RGL1Q9NZL6 768 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 TRAPPC10P48553 1259 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 MAP3K7CLP57077 242 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 BASP1P80723 227 aaKnown RBP10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 NSUN2Q08J23 767 aaKnown RBP eCLIP10.05□□□□□ -0.82e-8■■■■■ 36.9
CTDSPL-201ENST00000273179 POLKQ9UBT6 870 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 F8VZ95 297 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 CCDC150Q8NCX0 1101 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 SMARCC2Q8TAQ2 1214 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 SART1O43290 800 aaKnown RBP10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 ICA1Q05084 483 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 GTF3C6Q969F1 213 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 PYGBP11216 843 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 YY1P25490 414 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 SH2D4BQ5SQS7 431 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 CCDC30Q5VVM6 783 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 PARD3BQ8TEW8 1205 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 DTNBP1Q96EV8 351 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
CTDSPL-201ENST00000273179 TCP11Q8WWU5 503 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 ZNF711Q9Y462 761 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 SNX5Q9Y5X3 404 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 SPATA31E1Q6ZUB1 1445 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 ATP8B1O43520 1251 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 PRPF40AO75400 957 aaKnown RBP10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 CYP2C19P33261 490 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 CETN2P41208 172 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 SKOR1P84550 965 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 SFMBT2Q5VUG0 894 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 SPDYE1Q8NFV5 336 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 KIAA1524Q8TCG1 905 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 VCPKMTQ9H867 229 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 KCTD5Q9NXV2 234 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 MORC2Q9Y6X9 1032 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 PREPLQ4J6C6 727 aaPredicted RBP10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 TSPY26PQ9H489 355 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 CCSER2Q9H7U1 834 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 FAM135AQ9P2D6 1515 aa10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 ZCCHC11Q5TAX3 1644 aaKnown RBP10.04□□□□□ -0.8
CTDSPL-201ENST00000273179 BOLA2-SMG1P6H3BVE0 249 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 RBP3P10745 1247 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 BRD4O60885 1362 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 ITIH3Q06033 890 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 MUM1L1Q5H9M0 696 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 ODR4Q5SWX8 454 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 KANK3Q6NY19 840 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 PPP1R21Q6ZMI0 780 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 SND1Q7KZF4 910 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 NT5DC4Q86YG4 428 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 OSCARQ8IYS5 282 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 PPP1R9BQ96SB3 815 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 DRC3Q9H069 523 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 PDRG1Q9NUG6 133 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 HOOK1Q9UJC3 728 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 PREX2Q70Z35 1606 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 P4HA2O15460 535 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 EPS15P42566 896 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 CUL3Q13618 768 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 ANO1Q5XXA6 986 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 GATAD2AQ86YP4 633 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 MAPK8IP3Q9UPT6 1336 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 CCDC144CPQ8IYA2 1237 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 HAUS7Q99871 368 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 SENP7Q9BQF6 1050 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 ANKIB1Q9P2G1 1089 aa10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
CTDSPL-201ENST00000273179 SCAPERQ9BY12 1400 aa10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 RHOXF2BP0C7M4 288 aa10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 HARSP12081 509 aaKnown RBP10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 AKAP17AQ02040 695 aaKnown RBP10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 EIF4A2Q14240 407 aaKnown RBP10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 KSR2Q6VAB6 950 aa10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 RHOXF2Q9BQY4 288 aa10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 COL4A3BPQ9Y5P4 624 aa10.02□□□□□ -0.8
CTDSPL-201ENST00000273179 PLCH2O75038 1416 aa10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 PARP1P09874 1014 aaKnown RBP10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 TPD52P55327 224 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 MRPS35P82673 323 aaKnown RBP10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 C10orf76Q5T2E6 689 aa10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 AATFQ9NY61 560 aaKnown RBP eCLIP10.02□□□□□ -0.818e-6■■■■□ 21.3
CTDSPL-201ENST00000273179 A0A087WUV0 522 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 SMIM24O75264 130 aa10.02□□□□□ -0.81
CTDSPL-201ENST00000273179 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms