RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 M0R2C6 588 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 PPARAQ07869 468 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 SEMA3EO15041 775 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 NIM1KQ8IY84 436 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 FNBP4Q8N3X1 1017 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 CCDC12Q8WUD4 166 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 KRT18P05783 430 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 TMC4Q7Z404 712 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 CYP21A2P08686 494 aa16.74■□□□□ 0.27
PDLIM2-201ENST00000265810 SSBP05455 408 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 TPM1P09493 284 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 NPR1P16066 1061 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 CERS3Q8IU89 383 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 FSIP1Q8NA03 581 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 TSR1Q2NL82 804 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 USP40Q9NVE5 1235 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 TEKT1Q969V4 418 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
PDLIM2-201ENST00000265810 CSF1RP07333 972 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 EIF6P56537 245 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 UTYO14607 1347 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 ME3Q16798 604 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 CNTNAP4Q9C0A0 1308 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 BCL9O00512 1426 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 FAM47AQ5JRC9 791 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 GRPEL1Q9HAV7 217 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 ZHX3Q9H4I2 956 aa16.72■□□□□ 0.27
PDLIM2-201ENST00000265810 DYNLL1P63167 89 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 CEP57L1Q8IYX8 460 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 BTDP43251 543 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 UBE2HP62256 183 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 CCDC183Q5T5S1 534 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 RBM27Q9P2N5 1060 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 TNS2Q63HR2 1409 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 NFAT5O94916 1531 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 NTSR2O95665 410 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 CYP2E1P05181 493 aaPredicted RBP16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 TFAP4Q01664 338 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 PPP4R3BQ5MIZ7 849 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 MASTLQ96GX5 879 aa16.71■□□□□ 0.27
PDLIM2-201ENST00000265810 PRKAB2O43741 272 aa16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 CUL5Q93034 780 aa16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 ARPP21Q9UBL0 812 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 UBN2Q6ZU65 1347 aa16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 JAK2O60674 1132 aa16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 DLGAP5Q15398 846 aa16.7■□□□□ 0.26
PDLIM2-201ENST00000265810 CD2BP2O95400 341 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 TPCN1Q9ULQ1 816 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 LCORLQ8N3X6 602 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 NAPAP54920 295 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 SCARF1Q14162 830 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 DHX8Q14562 1220 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 AKAP12Q02952 1782 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 SMC2O95347 1197 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 PDILTQ8N807 584 aa16.69■□□□□ 0.26
PDLIM2-201ENST00000265810 TNNI2P48788 182 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 SF3B3Q15393 1217 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 CCDC148Q8NFR7 591 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 PHKBQ93100 1093 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 SLC4A9Q96Q91 983 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 SLIT3O75094 1523 aa16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 MARCKSP29966 332 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-201ENST00000265810 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
PDLIM2-201ENST00000265810 C21orf2O43822 256 aa16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 MECOMQ03112 1051 aa16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 WDR78Q5VTH9 848 aa16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 BMP2KQ9NSY1 1161 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 USP42Q9H9J4 1324 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-201ENST00000265810 TTLL6Q8N841 843 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms