RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 TOP2AP11388 1531 aaKnown RBP5.53□□□□□ -1.52
CDRT1-201ENST00000261644 NEFLP07196 543 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 C8AP07357 584 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 CTSBP07858 339 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 NFICP08651 508 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 GRIA4P48058 902 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 AP3B2Q13367 1082 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 PHLDB3Q6NSJ2 640 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 OGFOD3Q6PK18 319 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 ZNF765Q7L2R6 523 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 WFDC3Q8IUB2 231 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 CCER1Q8TC90 406 aaPredicted RBP5.53□□□□□ -1.52
CDRT1-201ENST00000261644 ZNF576Q9H609 170 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 LIN7BQ9HAP6 207 aa5.53□□□□□ -1.52
CDRT1-201ENST00000261644 PAPLNO95428 1278 aa5.52□□□□□ -1.53
CDRT1-201ENST00000261644 AAMPQ13685 434 aa5.52□□□□□ -1.53
CDRT1-201ENST00000261644 RPS26P11Q5JNZ5 115 aaPredicted RBP5.52□□□□□ -1.53
CDRT1-201ENST00000261644 BCL7CQ8WUZ0 217 aaPredicted RBP5.52□□□□□ -1.53
CDRT1-201ENST00000261644 CORO1BQ9BR76 489 aa5.52□□□□□ -1.53
CDRT1-201ENST00000261644 CCDC87Q9NVE4 849 aa5.52□□□□□ -1.53
CDRT1-201ENST00000261644 SLC5A6Q9Y289 635 aa5.52□□□□□ -1.53
CDRT1-201ENST00000261644 RAB6AP20340 208 aa5.51□□□□□ -1.53
CDRT1-201ENST00000261644 CYP27C1Q4G0S4 372 aa5.51□□□□□ -1.53
CDRT1-201ENST00000261644 PRPF40BQ6NWY9 871 aaKnown RBP5.51□□□□□ -1.53
CDRT1-201ENST00000261644 WDR18Q9BV38 432 aa5.51□□□□□ -1.53
CDRT1-201ENST00000261644 MKNK2Q9HBH9 465 aa5.51□□□□□ -1.53
CDRT1-201ENST00000261644 PEG3Q9GZU2 1588 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 WIZO95785 1651 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 BIN1O00499 593 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 AOC2O75106 756 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 ASPAP45381 313 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 SPRED3Q2MJR0 410 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 AKAP4Q5JQC9 854 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 DYMQ7RTS9 669 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 AP4E1Q9UPM8 1137 aa5.5□□□□□ -1.53
CDRT1-201ENST00000261644 CEP162Q5TB80 1403 aa5.49□□□□□ -1.53
CDRT1-201ENST00000261644 HNRNPUQ00839 825 aaKnown RBP eCLIP5.49□□□□□ -1.53
CDRT1-201ENST00000261644 ATG4DQ86TL0 474 aaPredicted RBP5.49□□□□□ -1.53
CDRT1-201ENST00000261644 CITED4Q96RK1 184 aa5.49□□□□□ -1.53
CDRT1-201ENST00000261644 FAM129BQ96TA1 746 aa5.49□□□□□ -1.53
CDRT1-201ENST00000261644 RAD18Q9NS91 495 aa5.49□□□□□ -1.53
CDRT1-201ENST00000261644 KRT82Q9NSB4 513 aa5.49□□□□□ -1.53
CDRT1-201ENST00000261644 BAZ1BQ9UIG0 1483 aaKnown RBP5.49□□□□□ -1.53
CDRT1-201ENST00000261644 CCDC88BA6NC98 1476 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 DYNC1LI2O43237 492 aaPredicted RBP5.48□□□□□ -1.53
CDRT1-201ENST00000261644 ICMTO60725 284 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 POLR3DP05423 398 aaPredicted RBP5.48□□□□□ -1.53
CDRT1-201ENST00000261644 FUT4P22083 530 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 PDE3BQ13370 1112 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 ECM1Q16610 540 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 DNAJC25Q9H1X3 360 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 ATXN3LQ9H3M9 355 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 LRRC4CQ9HCJ2 640 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 ABCB6Q9NP58 842 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 CRIM1Q9NZV1 1036 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 KIF21BO75037 1637 aa5.48□□□□□ -1.53
CDRT1-201ENST00000261644 SMARCA2P51531 1590 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 GOLGA3Q08378 1498 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 TMPRSS2O15393 492 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 ECEL1O95672 775 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 ZNF792Q3KQV3 632 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 B4GALNT3Q6L9W6 998 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 NETO1Q8TDF5 533 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 VAV3Q9UKW4 847 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 PPP1R9AQ9ULJ8 1098 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 DAGLAQ9Y4D2 1042 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 PCDHGC5Q9Y5F6 944 aa5.47□□□□□ -1.53
CDRT1-201ENST00000261644 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.47□□□□□ -1.53
CDRT1-201ENST00000261644 SMARCA4P51532 1647 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 CPNE3O75131 537 aaKnown RBP5.46□□□□□ -1.54
CDRT1-201ENST00000261644 ZNF211Q13398 564 aaPredicted RBP5.46□□□□□ -1.54
CDRT1-201ENST00000261644 PLCL1Q15111 1095 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 KIF4BQ2VIQ3 1234 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 SPRED2Q7Z698 418 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 CCDC82Q8N4S0 544 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 GLIS3Q8NEA6 775 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 EHD4Q9H223 541 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 BRPF3Q9ULD4 1205 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 USTQ9Y2C2 406 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 CARMIL2Q6F5E8 1435 aa5.46□□□□□ -1.54
CDRT1-201ENST00000261644 IGHA2P01877 340 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 ARHGAP4P98171 946 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 ID3Q02535 119 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 PRKCQQ04759 706 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 PDE3AQ14432 1141 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 ZNF574Q6ZN55 896 aaPredicted RBP5.45□□□□□ -1.54
CDRT1-201ENST00000261644 FANCD2OSQ96PS1 177 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 NPHS2Q9NP85 383 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 TRAK1Q9UPV9 953 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 CUX2O14529 1486 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 CEP164Q9UPV0 1460 aa5.45□□□□□ -1.54
CDRT1-201ENST00000261644 ARID3CA6NKF2 412 aa5.44□□□□□ -1.54
CDRT1-201ENST00000261644 NDUFB5O43674 189 aa5.44□□□□□ -1.54
CDRT1-201ENST00000261644 ABL1P00519 1130 aa5.44□□□□□ -1.54
CDRT1-201ENST00000261644 SLFN14P0C7P3 912 aa5.44□□□□□ -1.54
CDRT1-201ENST00000261644 IFI16Q16666 785 aaKnown RBP5.44□□□□□ -1.54
CDRT1-201ENST00000261644 USPL1Q5W0Q7 1092 aa5.44□□□□□ -1.54
CDRT1-201ENST00000261644 FAM9AQ8IZU1 332 aaPredicted RBP5.44□□□□□ -1.54
CDRT1-201ENST00000261644 BHLHE22Q8NFJ8 381 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms