RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TP53INP2Q8IXH6 220 aa8.98□□□□□ -0.97
TRA2B-201ENST00000259043 TRIM56Q9BRZ2 755 aaKnown RBP8.98□□□□□ -0.97
TRA2B-201ENST00000259043 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
TRA2B-201ENST00000259043 TRAK1Q9UPV9 953 aa8.98□□□□□ -0.97
TRA2B-201ENST00000259043 CYP26A1O43174 497 aa8.97□□□□□ -0.97
TRA2B-201ENST00000259043 CTSBP07858 339 aa8.97□□□□□ -0.97
TRA2B-201ENST00000259043 USP11P51784 963 aa8.97□□□□□ -0.97
TRA2B-201ENST00000259043 FAAP100Q0VG06 881 aa8.97□□□□□ -0.97
TRA2B-201ENST00000259043 POU5F2Q8N7G0 328 aa8.97□□□□□ -0.97
TRA2B-201ENST00000259043 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
TRA2B-201ENST00000259043 BSDC1Q9NW68 430 aaPredicted RBP8.97□□□□□ -0.97
TRA2B-201ENST00000259043 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRA2B-201ENST00000259043 RPS26P11Q5JNZ5 115 aaPredicted RBP8.96□□□□□ -0.98
TRA2B-201ENST00000259043 EXOSC6Q5RKV6 272 aaKnown RBP8.96□□□□□ -0.98
TRA2B-201ENST00000259043 SHISA5Q8N114 240 aa8.96□□□□□ -0.98
TRA2B-201ENST00000259043 FBLIM1Q8WUP2 373 aa8.96□□□□□ -0.98
TRA2B-201ENST00000259043 BCO2Q9BYV7 579 aa8.96□□□□□ -0.98
TRA2B-201ENST00000259043 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
TRA2B-201ENST00000259043 DRD2P14416 443 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 JUNBP17275 347 aaPredicted RBP8.95□□□□□ -0.98
TRA2B-201ENST00000259043 ITGB5P18084 799 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.982e-9■□□□□ 10.4
TRA2B-201ENST00000259043 AEBP1Q8IUX7 1158 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 TBC1D32Q96NH3 1257 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 YIPF2Q9BWQ6 316 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 NLRP2Q9NX02 1062 aa8.95□□□□□ -0.98
TRA2B-201ENST00000259043 ECEL1O95672 775 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 C8AP07357 584 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 MAPK8P45983 427 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 ZAR1Q86SH2 424 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 FBF1Q8TES7 1133 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 EZH1Q92800 747 aaPredicted RBP8.94□□□□□ -0.98
TRA2B-201ENST00000259043 PRKAG2Q9UGJ0 569 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 WWC3Q9ULE0 1092 aa8.94□□□□□ -0.98
TRA2B-201ENST00000259043 P4HBP07237 508 aaKnown RBP8.93□□□□□ -0.98
TRA2B-201ENST00000259043 MAOBP27338 520 aa8.93□□□□□ -0.98
TRA2B-201ENST00000259043 ADMP35318 185 aa8.93□□□□□ -0.98
TRA2B-201ENST00000259043 FCGRTP55899 365 aa8.93□□□□□ -0.98
TRA2B-201ENST00000259043 SOX4Q06945 474 aaPredicted RBP8.93□□□□□ -0.98
TRA2B-201ENST00000259043 NXPE4Q6UWF7 544 aa8.93□□□□□ -0.98
TRA2B-201ENST00000259043 C2CD4AQ8NCU7 369 aaPredicted RBP8.93□□□□□ -0.98
TRA2B-201ENST00000259043 AGBL5Q8NDL9 886 aa8.93□□□□□ -0.98
TRA2B-201ENST00000259043 CYP11A1P05108 521 aa8.92□□□□□ -0.98
TRA2B-201ENST00000259043 COL19A1Q14993 1142 aa8.92□□□□□ -0.98
TRA2B-201ENST00000259043 POU4F3Q15319 338 aa8.92□□□□□ -0.98
TRA2B-201ENST00000259043 C3orf58Q8NDZ4 430 aa8.92□□□□□ -0.98
TRA2B-201ENST00000259043 DTHD1Q6ZMT9 781 aa8.91□□□□□ -0.98
TRA2B-201ENST00000259043 FLCNQ8NFG4 579 aa8.91□□□□□ -0.98
TRA2B-201ENST00000259043 OSBPL7Q9BZF2 842 aa8.91□□□□□ -0.98
TRA2B-201ENST00000259043 XRCC5P13010 732 aaKnown RBP8.9□□□□□ -0.98
TRA2B-201ENST00000259043 DUSP27Q5VZP5 1158 aa8.9□□□□□ -0.98
TRA2B-201ENST00000259043 ALG1LQ6GMV1 187 aa8.9□□□□□ -0.98
TRA2B-201ENST00000259043 GATA6Q92908 595 aa8.9□□□□□ -0.98
TRA2B-201ENST00000259043 PAK6Q9NQU5 681 aaPredicted RBP8.9□□□□□ -0.98
TRA2B-201ENST00000259043 FAM170BA6NMN3 283 aa8.89□□□□□ -0.99
TRA2B-201ENST00000259043 ZNF157P51786 506 aaPredicted RBP8.89□□□□□ -0.99
TRA2B-201ENST00000259043 AP3B2Q13367 1082 aa8.89□□□□□ -0.99
TRA2B-201ENST00000259043 CYP27A1Q02318 531 aa8.88□□□□□ -0.99
TRA2B-201ENST00000259043 DDX54Q8TDD1 881 aaKnown RBP8.88□□□□□ -0.99
TRA2B-201ENST00000259043 CORO1BQ9BR76 489 aa8.88□□□□□ -0.99
TRA2B-201ENST00000259043 ZFYVE1Q9HBF4 777 aa8.88□□□□□ -0.99
TRA2B-201ENST00000259043 PPP4R2Q9NY27 417 aa8.88□□□□□ -0.99
TRA2B-201ENST00000259043 ADH5P11766 374 aa8.87□□□□□ -0.99
TRA2B-201ENST00000259043 MAP7Q14244 749 aa8.87□□□□□ -0.99
TRA2B-201ENST00000259043 DNAJC14Q6Y2X3 702 aaPredicted RBP8.87□□□□□ -0.99
TRA2B-201ENST00000259043 SRCIN1Q9C0H9 1055 aa8.87□□□□□ -0.99
TRA2B-201ENST00000259043 ZC3H7BQ9UGR2 993 aaKnown RBP8.87□□□□□ -0.99
TRA2B-201ENST00000259043 PDZD3Q86UT5 571 aa8.86□□□□□ -0.99
TRA2B-201ENST00000259043 WDR18Q9BV38 432 aa8.86□□□□□ -0.99
TRA2B-201ENST00000259043 TMEM39AQ9NV64 488 aa8.86□□□□□ -0.99
TRA2B-201ENST00000259043 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 CCDC180Q9P1Z9 1646 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 ANKRD33BA6NCL7 494 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 GIPC1O14908 333 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 LDHBP07195 334 aaKnown RBP8.85□□□□□ -0.99
TRA2B-201ENST00000259043 NFICP08651 508 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 ATP2B2Q01814 1243 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 STK35Q8TDR2 534 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
TRA2B-201ENST00000259043 CCDC86Q9H6F5 360 aaKnown RBP8.85□□□□□ -0.99
TRA2B-201ENST00000259043 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 AKAP2Q9Y2D5 859 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 ACTL7BQ9Y614 415 aa8.85□□□□□ -0.99
TRA2B-201ENST00000259043 AOC2O75106 756 aa8.84□□□□□ -0.99
TRA2B-201ENST00000259043 GSTT1P30711 240 aa8.84□□□□□ -0.99
TRA2B-201ENST00000259043 HP1BP3Q5SSJ5 553 aaPredicted RBP8.84□□□□□ -0.99
TRA2B-201ENST00000259043 ZNF765Q7L2R6 523 aa8.84□□□□□ -0.99
TRA2B-201ENST00000259043 NPAS4Q8IUM7 802 aa8.84□□□□□ -0.99
TRA2B-201ENST00000259043 ANKRD24Q8TF21 1146 aa8.84□□□□□ -0.99
TRA2B-201ENST00000259043 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
TRA2B-201ENST00000259043 NECAB3Q96P71 396 aaPredicted RBP8.84□□□□□ -0.99
TRA2B-201ENST00000259043 C12orf49Q9H741 205 aa8.84□□□□□ -0.99
TRA2B-201ENST00000259043 GPN3Q9UHW5 284 aaPredicted RBP8.84□□□□□ -0.99
TRA2B-201ENST00000259043 ZNF862O60290 1169 aa8.83□□□□□ -1
TRA2B-201ENST00000259043 PAPLNO95428 1278 aa8.83□□□□□ -1
TRA2B-201ENST00000259043 GSTP1P09211 210 aaKnown RBP8.83□□□□□ -1
TRA2B-201ENST00000259043 KRTAP4-9Q9BYQ8 210 aa8.83□□□□□ -1
TRA2B-201ENST00000259043 SEMA6CQ9H3T2 930 aa8.83□□□□□ -1
TRA2B-201ENST00000259043 RNF19AQ9NV58 838 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms