RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ARID5AQ03989 594 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 PHF23Q9BUL5 403 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 MMRN2Q9H8L6 949 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 CHPF2Q9P2E5 772 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 I3L4J1 428 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GIGYF1O75420 1035 aaPredicted RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 ALDH1L1O75891 902 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 MTMR3Q13615 1198 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 RHPN1Q8TCX5 695 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 GTF3C6Q969F1 213 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 NCBP1Q09161 790 aaKnown RBP5.39□□□□□ -1.55
RC3H1-201ENST00000258349 CALCOCO2Q13137 446 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 TRPC3Q13507 836 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 WDR78Q5VTH9 848 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 IQUBQ8NA54 791 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 KCNK9Q9NPC2 374 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 CROCCQ5TZA2 2017 aa5.39□□□□□ -1.55
RC3H1-201ENST00000258349 PTCD1O75127 700 aaKnown RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PPFIA1Q13136 1202 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 NME9Q86XW9 330 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 NECAB1Q8N987 351 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PPFIBP2Q8ND30 876 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 CREB3L3Q68CJ9 461 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 SYCE1Q8N0S2 351 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 ADCY10Q96PN6 1610 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 HMGB1P1B2RPK0 211 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 DTHD1Q6ZMT9 781 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 CCDC25Q86WR0 208 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 TMEM87AQ8NBN3 555 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 TBC1D31Q96DN5 1066 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 NUP58Q9BVL2 599 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PI4KAP2A4QPH2 592 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 GOLGA6BA6NDN3 693 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 CALUO43852 315 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 INPP5BP32019 993 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 MAP7Q14244 749 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 DENND2CQ68D51 928 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 SPATS2Q86XZ4 545 aaKnown RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 C10orf67Q8IYJ2 551 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PI4KAP1Q8N8J0 262 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PSMD1Q99460 953 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 SLC4A4Q9Y6R1 1079 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 MAGEB6P1A0A0J9YX57 407 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 CRCPO75575 148 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 ARL1P40616 181 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 IL15P40933 162 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 EVCP57679 992 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 INSRP06213 1382 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 MYL5Q02045 173 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PCK1P35558 622 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 RUFY4Q6ZNE9 571 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 MRPL50Q8N5N7 158 aaKnown RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 GABPB2Q8TAK5 448 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 HAUS2Q9NVX0 235 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 SSH2Q76I76 1423 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 ARID4AP29374 1257 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 CLNS1AP54105 237 aaKnown RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 NMIQ13287 307 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 FCHSD1Q86WN1 690 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 DHX58Q96C10 678 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 VAT1LQ9HCJ6 419 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 ZRANB1Q9UGI0 708 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 HPDP32754 393 aaPredicted RBP5.38□□□□□ -1.55
RC3H1-201ENST00000258349 C8orf74Q6P047 294 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 IGSF22Q8N9C0 903 aa5.38□□□□□ -1.55
RC3H1-201ENST00000258349 PLCD1P51178 756 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 HS2ST1Q7LGA3 356 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 CERS3Q8IU89 383 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 USHBP1Q8N6Y0 703 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 CEP120Q8N960 986 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 BRF1Q92994 677 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 CASQ2O14958 399 aaPredicted RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 VIMP08670 466 aaKnown RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 MCM7P33993 719 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 PPM1FP49593 454 aaPredicted RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 KARSQ15046 597 aaKnown RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 ANKRD13DQ6ZTN6 518 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 DHX32Q7L7V1 743 aaKnown RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 RNF113AO15541 343 aaKnown RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 RASSF2P50749 326 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 ATP8B2P98198 1209 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 SYT10Q6XYQ8 523 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 CCDC65Q8IXS2 484 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 VPS52Q8N1B4 723 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 EPSTI1Q96J88 318 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 RPGRIP1Q96KN7 1286 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 USP26Q9BXU7 913 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 MICAL3Q7RTP6 2002 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 ZNF75DP51815 510 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 TTLL12Q14166 644 aaPredicted RBP5.37□□□□□ -1.55
RC3H1-201ENST00000258349 CCDC38Q502W7 563 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 NUF2Q9BZD4 464 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 NYXQ9GZU5 481 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 GLT8D2Q9H1C3 349 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 ITIH3Q06033 890 aa5.37□□□□□ -1.55
RC3H1-201ENST00000258349 LIN9Q5TKA1 542 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms