RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 UBXN4Q92575 508 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
CCNA1-201ENST00000255465 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCNA1-201ENST00000255465 N4BP2Q86UW6 1770 aaPredicted RBP13.64□□□□□ -0.23
CCNA1-201ENST00000255465 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 EFCAB8A8MWE9 144 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 CCP110O43303 1012 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 ANKRD18AQ8IVF6 992 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 SPC24Q8NBT2 197 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 USP26Q9BXU7 913 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 CD2APQ9Y5K6 639 aa13.64□□□□□ -0.23
CCNA1-201ENST00000255465 ATXN2Q99700 1313 aaKnown RBP13.64□□□□□ -0.23
CCNA1-201ENST00000255465 AP5Z1O43299 807 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 TBC1D8O95759 1140 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 SERPINB2P05120 415 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 PRPHP41219 470 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 ZNF75DP51815 510 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
CCNA1-201ENST00000255465 NEBLO76041 1014 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 SCP2P22307 547 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 MAGEA8P43361 318 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
CCNA1-201ENST00000255465 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 PHAXQ9H814 394 aaKnown RBP13.63□□□□□ -0.23
CCNA1-201ENST00000255465 CARMIL3Q8ND23 1372 aa13.63□□□□□ -0.23
CCNA1-201ENST00000255465 C10orf71Q711Q0 1435 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 ANKRD31Q8N7Z5 1873 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 A0A1B0GUA9 196 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 GPTP24298 496 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 NF2P35240 595 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
CCNA1-201ENST00000255465 NLGN2Q8NFZ4 835 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 STK31Q9BXU1 1019 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 PDRG1Q9NUG6 133 aa13.62□□□□□ -0.23
CCNA1-201ENST00000255465 NIP7Q9Y221 180 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCNA1-201ENST00000255465 RDXP35241 583 aaKnown RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 PREPLQ4J6C6 727 aaPredicted RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 NAIF1Q69YI7 327 aaPredicted RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 CC2D1AQ6P1N0 951 aaPredicted RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 CCAR2Q8N163 923 aaKnown RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 BICD2Q8TD16 824 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 ATP10DQ9P241 1426 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 CHUKO15111 745 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 SLC5A9Q2M3M2 681 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 ANKRD13DQ6ZTN6 518 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 ZGPATQ8N5A5 531 aaKnown RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 PLBD2Q8NHP8 589 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 TDRD7Q8NHU6 1098 aaKnown RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 CPSF2Q9P2I0 782 aaKnown RBP13.61□□□□□ -0.23
CCNA1-201ENST00000255465 ATP6V1DQ9Y5K8 247 aa13.61□□□□□ -0.23
CCNA1-201ENST00000255465 BRCA1P38398 1863 aaKnown RBP13.6□□□□□ -0.23
CCNA1-201ENST00000255465 TTC41PQ6P2S7 1318 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
CCNA1-201ENST00000255465 PPFIA2O75334 1257 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 TUBB4BP68371 445 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 ANKRD45Q5TZF3 282 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 LRRC8AQ8IWT6 810 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 DRC7Q8IY82 874 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 ZNF34Q8IZ26 560 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 HOMER3Q9NSC5 361 aa13.6□□□□□ -0.23
CCNA1-201ENST00000255465 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCNA1-201ENST00000255465 MAP2K7O14733 419 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 CHMLP26374 656 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 BRD3Q15059 726 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 C1QTNF12Q5T7M4 302 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
CCNA1-201ENST00000255465 ZNF483Q8TF39 744 aaPredicted RBP13.59□□□□□ -0.23
CCNA1-201ENST00000255465 CACTINQ8WUQ7 758 aaKnown RBP13.59□□□□□ -0.23
CCNA1-201ENST00000255465 TMX3Q96JJ7 454 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 CABS1Q96KC9 395 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 ACBD3Q9H3P7 528 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 SRGAP3O43295 1099 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 RTN2O75298 545 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 SNUPNO95149 360 aaKnown RBP13.59□□□□□ -0.23
CCNA1-201ENST00000255465 CD151P48509 253 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 GSDMDP57764 484 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 LRMPQ12912 555 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
CCNA1-201ENST00000255465 G2E3Q7L622 706 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 PRPF38AQ8NAV1 312 aaKnown RBP13.59□□□□□ -0.23
CCNA1-201ENST00000255465 MRFAP1L1Q96HT8 127 aa13.59□□□□□ -0.23
CCNA1-201ENST00000255465 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.23
CCNA1-201ENST00000255465 MYBL2P10244 700 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 TGFB2P61812 414 aa13.58□□□□□ -0.24
CCNA1-201ENST00000255465 TCIRG1Q13488 830 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms