RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PSMD1Q99460 953 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
NIP7-202ENST00000254941 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
NIP7-202ENST00000254941 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 PRKAB2O43741 272 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 LDHCP07864 332 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 AK2P54819 239 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
NIP7-202ENST00000254941 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 NAPBQ9H115 298 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 DBNDD1Q9H9R9 158 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 PDRG1Q9NUG6 133 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 AATFQ9NY61 560 aaKnown RBP eCLIP11.24□□□□□ -0.61
NIP7-202ENST00000254941 FOCADQ5VW36 1801 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 ARFGEF1Q9Y6D6 1849 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 UTRNP46939 3433 aa11.24□□□□□ -0.61
NIP7-202ENST00000254941 LAMB1P07942 1786 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 PPP4CP60510 307 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 HAND2P61296 217 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 GIMAP6Q6P9H5 292 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
NIP7-202ENST00000254941 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 ECE2O60344 883 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 AOC3Q16853 763 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
NIP7-202ENST00000254941 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
NIP7-202ENST00000254941 PPP1R1BQ9UD71 204 aaPredicted RBP11.23□□□□□ -0.61
NIP7-202ENST00000254941 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 BAG3O95817 575 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
NIP7-202ENST00000254941 TDO2P48775 406 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 FKBP1AP62942 108 aaKnown RBP11.22□□□□□ -0.61
NIP7-202ENST00000254941 EXOSC10Q01780 885 aaKnown RBP11.22□□□□□ -0.61
NIP7-202ENST00000254941 ANKRD1Q15327 319 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 STRIP1Q5VSL9 837 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
NIP7-202ENST00000254941 CERS3Q8IU89 383 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 CERS5Q8N5B7 392 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
NIP7-202ENST00000254941 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
NIP7-202ENST00000254941 LIMCH1Q9UPQ0 1083 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 NAV1Q8NEY1 1877 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 GAKO14976 1311 aa11.22□□□□□ -0.61
NIP7-202ENST00000254941 MYH1P12882 1939 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 GPR75-ASB3A0A0A6YYF3 556 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 PPIP5K2O43314 1243 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 DDIT3P35638 169 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 CUL4AQ13619 759 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 ATP8A2Q9NTI2 1148 aa11.21□□□□□ -0.61
NIP7-202ENST00000254941 TOB2Q14106 344 aaPredicted RBP11.21□□□□□ -0.62
NIP7-202ENST00000254941 DACT2Q5SW24 774 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 NOL8Q76FK4 1167 aaKnown RBP11.21□□□□□ -0.62
NIP7-202ENST00000254941 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 FBXL16Q8N461 479 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 NCOA7Q8NI08 942 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 FBXW7Q969H0 707 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 TCEANC2Q96MN5 208 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 NOL10Q9BSC4 688 aaKnown RBP11.21□□□□□ -0.62
NIP7-202ENST00000254941 AGXT2Q9BYV1 514 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 SPON1Q9HCB6 807 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 DCP1AQ9NPI6 582 aaPredicted RBP11.21□□□□□ -0.62
NIP7-202ENST00000254941 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.62
NIP7-202ENST00000254941 ADAMTSL1Q8N6G6 1762 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 TRDNQ13061 729 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 ILDR2Q71H61 639 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
NIP7-202ENST00000254941 INTS4Q96HW7 963 aaKnown RBP11.2□□□□□ -0.62
NIP7-202ENST00000254941 TTF2Q9UNY4 1162 aaKnown RBP11.2□□□□□ -0.62
NIP7-202ENST00000254941 COL4A5P29400 1685 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 WDR19Q8NEZ3 1342 aa11.2□□□□□ -0.62
NIP7-202ENST00000254941 DDX60LQ5H9U9 1706 aaKnown RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 YDJCA8MPS7 323 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 PLCG2P16885 1265 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 PPARAQ07869 468 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 Q6ZUG5 572 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 SH3RF3Q8TEJ3 882 aaPredicted RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 STAG1Q8WVM7 1258 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 LARP6Q9BRS8 491 aaKnown RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 MXD3Q9BW11 206 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 SH2B1Q9NRF2 756 aaPredicted RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 ZNF277Q9NRM2 450 aaPredicted RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
NIP7-202ENST00000254941 MCM5P33992 734 aa11.19□□□□□ -0.62
NIP7-202ENST00000254941 BTDP43251 543 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms