RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SYT1P21579 422 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 CCDC178Q5BJE1 867 aa12.52□□□□□ -0.41
COPA-201ENST00000241704 MYO1CO00159 1063 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 CYP2C19P33261 490 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 TNNI2P48788 182 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 MPHOSPH6Q99547 160 aaKnown RBP12.51□□□□□ -0.41
COPA-201ENST00000241704 ZDHHC9Q9Y397 364 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 MSL1Q68DK7 614 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
COPA-201ENST00000241704 TMC6Q7Z403 805 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 MICALL1Q8N3F8 863 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 FAM227BQ96M60 508 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
COPA-201ENST00000241704 ELP1O95163 1332 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 NAA30Q147X3 362 aaPredicted RBP12.51□□□□□ -0.41
COPA-201ENST00000241704 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
COPA-201ENST00000241704 LPIN2Q92539 896 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 SECISBP2LQ93073 1101 aaKnown RBP12.51□□□□□ -0.41
COPA-201ENST00000241704 JRKLQ9Y4A0 524 aa12.51□□□□□ -0.41
COPA-201ENST00000241704 APPBP2Q92624 585 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 VPS18Q9P253 973 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 GGA1Q9UJY5 639 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 DENND2AQ9ULE3 1009 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 TRIM37O94972 964 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 RTN1Q16799 776 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 PPFIBP1Q86W92 1011 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 ALG1Q9BT22 464 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 YY1AP1Q9H869 796 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 BCS1LQ9Y276 419 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 SNX14Q9Y5W7 946 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
COPA-201ENST00000241704 TRAF1Q13077 416 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
COPA-201ENST00000241704 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 EAF2Q96CJ1 260 aaPredicted RBP12.5□□□□□ -0.41
COPA-201ENST00000241704 NRXN1Q9ULB1 1477 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 PTCH1Q13635 1447 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 SLC27A2O14975 620 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
COPA-201ENST00000241704 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
COPA-201ENST00000241704 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
COPA-201ENST00000241704 CDR1P51861 262 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 CCDC129Q6ZRS4 1044 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
COPA-201ENST00000241704 RUFY1Q96T51 708 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 GEMIN8Q9NWZ8 242 aaKnown RBP12.49□□□□□ -0.41
COPA-201ENST00000241704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■□□□□ 10.4
COPA-201ENST00000241704 MROH5Q6ZUA9 1318 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 CPA1P15085 419 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 EVCP57679 992 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 FAM182BQ5T319 152 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 CHST3Q7LGC8 479 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 CNNM3Q8NE01 707 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
COPA-201ENST00000241704 PIK3C2BO00750 1634 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 GOLGA6L9A6NEM1 432 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 MAP2K2P36507 400 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 MCM6Q14566 821 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 VIRMAQ69YN4 1812 aaKnown RBP12.48□□□□□ -0.41
COPA-201ENST00000241704 MBD4O95243 580 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 HSPA4P34932 840 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 CUL4AQ13619 759 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 ZNHIT6Q9NWK9 470 aaKnown RBP12.48□□□□□ -0.41
COPA-201ENST00000241704 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 PRAMEF22A3QJZ6 481 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 HIBADHP31937 336 aaKnown RBP12.48□□□□□ -0.41
COPA-201ENST00000241704 GNAQP50148 359 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 KCNF1Q9H3M0 494 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 OSBPL3Q9H4L5 887 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 AXIN2Q9Y2T1 843 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 SUPT20HQ8NEM7 779 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 NRBP1Q9UHY1 535 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
COPA-201ENST00000241704 LOC102724159A0A0B4J2E5 919 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 ALDH1B1P30837 517 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 CTSWP56202 376 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 PWP2Q15269 919 aaKnown RBP12.47□□□□□ -0.41
COPA-201ENST00000241704 NBPF11Q86T75 865 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 MKRN1Q9UHC7 482 aaKnown RBP12.47□□□□□ -0.41
COPA-201ENST00000241704 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 MAP3K15Q6ZN16 1313 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
COPA-201ENST00000241704 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
COPA-201ENST00000241704 PDE6BP35913 854 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 KCNG4Q8TDN1 519 aa12.47□□□□□ -0.41
COPA-201ENST00000241704 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
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