RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 NUTM2AQ8IVF1 878 aaPredicted RBP16.54■□□□□ 0.24
PRDM4-201ENST00000228437 VSTM4Q8IW00 320 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 BCCIPQ9P287 314 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRDM4-201ENST00000228437 ARHGAP31Q2M1Z3 1444 aa16.54■□□□□ 0.24
PRDM4-201ENST00000228437 HSPD1P10809 573 aaKnown RBP16.53■□□□□ 0.24
PRDM4-201ENST00000228437 CT47A1Q5JQC4 288 aaPredicted RBP16.53■□□□□ 0.24
PRDM4-201ENST00000228437 GSPT2Q8IYD1 628 aaKnown RBP16.53■□□□□ 0.24
PRDM4-201ENST00000228437 RIN2Q8WYP3 895 aaPredicted RBP16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 CCDC151A5D8V7 595 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 B4E1Z4 1266 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 CASP1P29466 404 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 SSRP1Q08945 709 aaKnown RBP16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ZBTB43O43298 467 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ERLIN2O94905 339 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 YEATS4O95619 227 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 CASP8Q14790 479 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ATRIPQ8WXE1 791 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ERCC3P19447 782 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 EPHA10Q5JZY3 1008 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 ATL3Q6DD88 541 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 FAM76AQ8TAV0 307 aa16.53■□□□□ 0.24
PRDM4-201ENST00000228437 RNF40O75150 1001 aa16.52■□□□□ 0.24
PRDM4-201ENST00000228437 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
PRDM4-201ENST00000228437 CMA1P23946 247 aa16.52■□□□□ 0.24
PRDM4-201ENST00000228437 PIP4K2BP78356 416 aa16.52■□□□□ 0.24
PRDM4-201ENST00000228437 TAB2Q9NYJ8 693 aa16.52■□□□□ 0.24
PRDM4-201ENST00000228437 VWA3AA6NCI4 1184 aa16.52■□□□□ 0.23
PRDM4-201ENST00000228437 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.23
PRDM4-201ENST00000228437 CDC23Q9UJX2 597 aa16.52■□□□□ 0.23
PRDM4-201ENST00000228437 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
PRDM4-201ENST00000228437 CASP14P31944 242 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 CCDC122Q5T0U0 273 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
PRDM4-201ENST00000228437 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 ATP1A2P50993 1020 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 AIDAQ96BJ3 306 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 PLIN2Q99541 437 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 GOLGA6CA6NDK9 693 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 GOLGA6DP0CG33 693 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 KRT9P35527 623 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 TDO2P48775 406 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 POSTNQ15063 836 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 RBM43Q6ZSC3 357 aaKnown RBP16.51■□□□□ 0.23
PRDM4-201ENST00000228437 BCAS4Q8TDM0 211 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 CABP5Q9NP86 173 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 GOLGA6AQ9NYA3 693 aa16.51■□□□□ 0.23
PRDM4-201ENST00000228437 ATP5JP18859 108 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 RNASE9P60153 205 aaKnown RBP16.5■□□□□ 0.23
PRDM4-201ENST00000228437 RBL2Q08999 1139 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 STIM1Q13586 685 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 OTUD6BQ8N6M0 293 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 METP08581 1390 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 STX10O60499 249 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 TBC1D2BQ9UPU7 963 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
PRDM4-201ENST00000228437 A0A1W2PQ27 194 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 A0A1W2PQ64 194 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 A0A1W2PQD8 194 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 NDUFAB1O14561 156 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 SND1Q7KZF4 910 aaKnown RBP eCLIP16.5■□□□□ 0.23
PRDM4-201ENST00000228437 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 MRPL44Q9H9J2 332 aaKnown RBP16.5■□□□□ 0.23
PRDM4-201ENST00000228437 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 INPP5BP32019 993 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 VSNL1P62760 191 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 UBXN1Q04323 297 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 MYCBPQ99417 103 aaPredicted RBP16.5■□□□□ 0.23
PRDM4-201ENST00000228437 BLZF1Q9H2G9 400 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
PRDM4-201ENST00000228437 BTBD18B2RXH4 712 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 TEX33O43247 280 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 TICAM2Q86XR7 235 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 REXO1L1PQ8IX06 675 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 FUT8Q9BYC5 575 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 CRB1P82279 1406 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 NAPBQ9H115 298 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 CAPN7Q9Y6W3 813 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 SRGAP2O75044 1071 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 GCKRQ14397 625 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 METTL24Q5JXM2 366 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 KCTD16Q68DU8 428 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRDM4-201ENST00000228437 GNL3LQ9NVN8 582 aaKnown RBP16.49■□□□□ 0.23
PRDM4-201ENST00000228437 MRFAP1Q9Y605 127 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 REREQ9P2R6 1566 aa16.49■□□□□ 0.23
PRDM4-201ENST00000228437 ATP7BP35670 1465 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
PRDM4-201ENST00000228437 XBP1P17861 261 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms