RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CACYBPQ9HB71 228 aaKnown RBP11.86□□□□□ -0.51
TRPS1-201ENST00000220888 GIPC1O14908 333 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 ZSCAN30Q86W11 494 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 IQUBQ8NA54 791 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 IP6K1Q92551 441 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 TBC1D31Q96DN5 1066 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 ZSWIM4Q9H7M6 989 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
TRPS1-201ENST00000220888 DDX39AO00148 427 aaKnown RBP11.85□□□□□ -0.51
TRPS1-201ENST00000220888 SPTLC2O15270 562 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 C16orf45Q96MC5 204 aaPredicted RBP11.85□□□□□ -0.51
TRPS1-201ENST00000220888 CSRNP2Q9H175 543 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 CUL4BQ13620 913 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 LIN9Q5TKA1 542 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRPS1-201ENST00000220888 V9GYY5 206 aaPredicted RBP11.85□□□□□ -0.51
TRPS1-201ENST00000220888 ZSCAN22P10073 491 aaPredicted RBP11.85□□□□□ -0.51
TRPS1-201ENST00000220888 PPP1R21Q6ZMI0 780 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
TRPS1-201ENST00000220888 ESPNB1AK53 854 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 GADL1Q6ZQY3 521 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
TRPS1-201ENST00000220888 TRAF5O00463 557 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 KRT19P08727 400 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 PDE1AP54750 535 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 GTF3C6Q969F1 213 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 CARD10Q9BWT7 1032 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
TRPS1-201ENST00000220888 PLCD1P51178 756 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 SEL1L2Q5TEA6 688 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 MLXIPQ9HAP2 919 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 KRT86O43790 486 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 GNPTABQ3T906 1256 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 PLBD2Q8NHP8 589 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 STIM2Q9P246 746 aa11.84□□□□□ -0.51
TRPS1-201ENST00000220888 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 CTAGE8P0CG41 777 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 UBXN1Q04323 297 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 CALCOCO2Q13137 446 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 CTAGE6Q86UF2 777 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 CTAGE4Q8IX94 777 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.51
TRPS1-201ENST00000220888 KCNG1Q9UIX4 513 aa11.83□□□□□ -0.51
TRPS1-201ENST00000220888 NCAPH2Q6IBW4 605 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 MTRF1LQ9UGC7 380 aaKnown RBP11.83□□□□□ -0.52
TRPS1-201ENST00000220888 TRPM2O94759 1503 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 TIAM1Q13009 1591 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 POLR3GO15318 223 aaPredicted RBP11.83□□□□□ -0.52
TRPS1-201ENST00000220888 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
TRPS1-201ENST00000220888 CFBP00751 764 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.52
TRPS1-201ENST00000220888 PPP1R2P41236 205 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 TICAM2Q86XR7 235 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRPS1-201ENST00000220888 YTHDC2Q9H6S0 1430 aaKnown RBP11.83□□□□□ -0.52
TRPS1-201ENST00000220888 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 SDSP20132 328 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 USH1GQ495M9 461 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 CHURC1Q8WUH1 139 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 AFG3L2Q9Y4W6 797 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC171Q6TFL3 1326 aa11.83□□□□□ -0.52
TRPS1-201ENST00000220888 EYA2O00167 538 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
TRPS1-201ENST00000220888 P4HA1P13674 534 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 TNFAIP3P21580 790 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 HOXC9P31274 260 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 TRIM7Q9C029 511 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 BRPF3Q9ULD4 1205 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 CD19P15391 556 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 RXRAP19793 462 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 MAEAQ7L5Y9 396 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 SPOPO43791 374 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 CNKSR1Q969H4 720 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ZNF830Q96NB3 372 aaPredicted RBP11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 AATFQ9NY61 560 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRPS1-201ENST00000220888 RTEL1Q9NZ71 1219 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 TRPC6Q9Y210 931 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ASXL2Q76L83 1435 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ADCY7P51828 1080 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ZNF526Q8TF50 670 aaPredicted RBP11.82□□□□□ -0.52
TRPS1-201ENST00000220888 TEKT1Q969V4 418 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 SLAIN2Q9P270 581 aa11.82□□□□□ -0.52
TRPS1-201ENST00000220888 ADCY5O95622 1261 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 ABL1P00519 1130 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 CCDC25Q86WR0 208 aa11.81□□□□□ -0.52
TRPS1-201ENST00000220888 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms