RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 FAM133BQ5BKY9 247 aaKnown RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 NAPBQ9H115 298 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 RNF8O76064 485 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 HHATQ5VTY9 493 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 C16orf71Q8IYS4 520 aaPredicted RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 BRF1Q92994 677 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 DDX41Q9UJV9 622 aaKnown RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 FRMD4BQ9Y2L6 1034 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 PPP1R13BQ96KQ4 1090 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 Q9H521 79 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 BICD1Q96G01 975 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 PNMA6AP0CW24 399 aaPredicted RBP12.36□□□□□ -0.43
USP31-201ENST00000219689 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 CLCN6P51797 869 aa12.36□□□□□ -0.43
USP31-201ENST00000219689 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 CEP70Q8NHQ1 597 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 SYNCQ9H7C4 482 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 CCDC194A0A1B0GVG4 234 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 EIF4E1BA6NMX2 242 aaKnown RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 SATB1Q01826 763 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 I3L4J1 428 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 ADKP55263 362 aaKnown RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 INTUQ9ULD6 942 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 KIAA1107Q9UPP5 1409 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 MCM7P33993 719 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 TRPC3Q13507 836 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 ZNF644Q9H582 1327 aaPredicted RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 SYNRGQ9UMZ2 1314 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 PSMA7O14818 248 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■■■□□ 16.9
USP31-201ENST00000219689 SERPINB6P35237 376 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 ZNF711Q9Y462 761 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 CA8P35219 290 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 IARSP41252 1262 aaKnown RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 CCDC197Q8NCU1 140 aa12.35□□□□□ -0.43
USP31-201ENST00000219689 ACTN3Q08043 901 aaPredicted RBP12.35□□□□□ -0.43
USP31-201ENST00000219689 CALCOCO2Q13137 446 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 VPS16Q9H269 839 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 DYTNA2CJ06 578 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 RANBP6O60518 1105 aaKnown RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 PPP1R21Q6ZMI0 780 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 RILPQ96NA2 401 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 PSME1Q06323 249 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 SEL1L2Q5TEA6 688 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 NRBP1Q9UHY1 535 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 PCYT1AP49585 367 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 KLHL14Q9P2G3 628 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 SLC4A7Q9Y6M7 1214 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 ARHGAP6O43182 974 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 ASIC1P78348 528 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 SLF1Q9BQI6 1058 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 CTNNA1P35221 906 aaKnown RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 IRX4P78413 519 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 NCAPGQ9BPX3 1015 aa12.34□□□□□ -0.43
USP31-201ENST00000219689 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
USP31-201ENST00000219689 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.43
USP31-201ENST00000219689 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.33□□□□□ -0.43
USP31-201ENST00000219689 ENO4A6NNW6 628 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 TNIP1Q15025 636 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 ZMYND10O75800 440 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 ZC3H18Q86VM9 953 aaKnown RBP12.33□□□□□ -0.44
USP31-201ENST00000219689 SAR1BQ9Y6B6 198 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 MAP3K7O43318 606 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
USP31-201ENST00000219689 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.44
USP31-201ENST00000219689 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 PLCB3Q01970 1234 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 CFAP221Q4G0U5 840 aa12.33□□□□□ -0.44
USP31-201ENST00000219689 ARMCX6Q7L4S7 300 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 MCM10Q7L590 875 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 NUDCD3Q8IVD9 361 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 SSX2IPQ9Y2D8 614 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 NCAPD3P42695 1498 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 KRT10P13645 584 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 LONRF2Q1L5Z9 754 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
USP31-201ENST00000219689 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms