RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CDC37L1Q7L3B6 337 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 WDR66Q8TBY9 1149 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 GPHNQ9NQX3 736 aaPredicted RBP16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 HPS5Q9UPZ3 1129 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 NEDD4P46934 1319 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 DUOX1Q9NRD9 1551 aa16.83■□□□□ 0.28
RTFDC1-201ENST00000023939 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 GPSM2P81274 684 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 MECOMQ03112 1051 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 ZNF804AQ7Z570 1209 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 SGMS1Q86VZ5 419 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 FAM184AQ8NB25 1140 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 CNPY2Q9Y2B0 182 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 LRRC37AA6NMS7 1700 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 KIAA1551Q9HCM1 1747 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 B4E1Z4 1266 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 LIFRP42702 1097 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 CCT2P78371 535 aaKnown RBP16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 MFSD6Q6ZSS7 791 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
RTFDC1-201ENST00000023939 DTNBO60941 627 aa16.81■□□□□ 0.28
RTFDC1-201ENST00000023939 PCP11498 1178 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-201ENST00000023939 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-201ENST00000023939 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
RTFDC1-201ENST00000023939 TACC3Q9Y6A5 838 aa16.81■□□□□ 0.28
RTFDC1-201ENST00000023939 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 MRE11P49959 708 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 UBE2HP62256 183 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 DNM1Q05193 864 aaKnown RBP16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 CTDSPL2Q05D32 466 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 PPARAQ07869 468 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 SP8Q8IXZ3 490 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 NKX2-3Q8TAU0 364 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 ZSWIM5Q9P217 1185 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 GGA1Q9UJY5 639 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 ELP1O95163 1332 aa16.8■□□□□ 0.28
RTFDC1-201ENST00000023939 LTBP1Q14766 1721 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 FGRP09769 529 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 IL1R1P14778 569 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 KRT85P78386 507 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 RESTQ13127 1097 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 ZSCAN23Q3MJ62 389 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 DDX11Q96FC9 970 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 NID2Q14112 1375 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 CHD4Q14839 1912 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 ANKRD31Q8N7Z5 1873 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 H3BQV1 296 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 FDPSP14324 419 aaKnown RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 PRDX5P30044 214 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 SYAP1Q96A49 352 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
RTFDC1-201ENST00000023939 KDM4AO75164 1064 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 UFL1O94874 794 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 RCAN1P53805 252 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 APOA5Q6Q788 366 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 SDR42E1Q8WUS8 393 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 ATP8A2Q9NTI2 1148 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 TMEM63CQ9P1W3 806 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 RGS17Q9UGC6 210 aaPredicted RBP16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 TCHHQ07283 1943 aa16.78■□□□□ 0.28
RTFDC1-201ENST00000023939 CCDC88AQ3V6T2 1871 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 SRGNP10124 158 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 NPR1P16066 1061 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 GSTO1P78417 241 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 TMEM67Q5HYA8 995 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 SLC51AQ86UW1 340 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 FERMT3Q86UX7 667 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 GAS2L3Q86XJ1 694 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 TMTC2Q8N394 836 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 SCAND2PQ9GZW5 306 aaPredicted RBP16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 CD209Q9NNX6 404 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
RTFDC1-201ENST00000023939 FIBPO43427 364 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 LDHBP07195 334 aaKnown RBP16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 PDE6BP35913 854 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 NT5C2P49902 561 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 ATL3Q6DD88 541 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 GRPEL1Q9HAV7 217 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 CPLX1O14810 134 aa16.76■□□□□ 0.27
RTFDC1-201ENST00000023939 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms