RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Q9CYI0 393 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Sil1Q9EPK6 465 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Cacna1sQ02789 1880 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Mast3Q3U214 1321 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Csrnp1P59054 583 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Bach1P97302 739 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Usp28Q5I043 1051 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Znf496Q5SXI5 585 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Polr3gQ6NXY9 223 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ccdc82Q6PG04 518 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Ttc14Q9CSP9 761 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Odf2lQ9D478 642 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 IcoslgQ9JHJ8 322 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Syt10Q9R0N4 523 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Rps6ka4Q9Z2B9 773 aa12.15□□□□□ -0.46
Ptpre-208ENSMUST00000211788 Lama4P97927 1816 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Calcoco2A2A6M5 331 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Stox1B2RQL2 990 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 1700029H14RikE9PY36 240 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 CltaO08585 235 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Lins1Q3U1D0 764 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Klra4Q60651 263 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Nme8Q715T0 586 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Kcnf1Q7TSH7 493 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 U2af1l4Q8BGJ9 220 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Slc39a11Q8BWY7 342 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Terf2ipQ91VL8 393 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Zbtb43Q9DAI4 467 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 TnmdQ9EP64 317 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Myo1cQ9WTI7 1063 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Cfap44E9Q5M6 1843 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Lipo1J3QME6 396 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Fam170aQ66LM6 333 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Sgsm1Q8BPQ7 1093 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Mis12Q9CY25 206 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Dpf1Q9QX66 387 aa12.14□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Casz1Q9CWL2 1761 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 1700113H08RikE9Q9Q5 327 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 GabrdP22933 449 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Usp25P57080 1055 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 LyarQ08288 388 aaKnown RBP12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Mtmr3Q8K296 1196 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Pcdhb22Q91XZ8 794 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 CpvlQ9D3S9 478 aa12.13□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Gm13023A2A8N2 498 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Pde4bB1AWC9 736 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Cyp3a59D3Z2W7 503 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Mctp1E9PV86 951 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 CrcpO35427 148 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Hspa1lP16627 641 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Atp1b3P97370 278 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Spag5Q7TME2 1165 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ube3cQ80U95 1083 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ces1dQ8VCT4 565 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Add3Q9QYB5 706 aaKnown RBP12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Sh3bgrQ9WUZ7 214 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 GakQ99KY4 1305 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Zbtb7aO88939 569 aaKnown RBP12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 NapbP28663 298 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Casp1P29452 402 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Rtkn2Q14B46 604 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Gimap8Q75N62 688 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Tpcn2Q8BWC0 731 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Eaf2Q91ZD6 262 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Mmel1Q9JLI3 765 aa12.12□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Nhsl1Q8CAF4 1587 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Cfap99A0A140LIX9 648 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Krt24A1L317 512 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Card6E9PWH2 1175 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ankrd35E9Q9D8 996 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Rfc1P35601 1131 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Agtpbp1Q641K1 1218 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ttc27Q8CD92 847 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 DymQ8CHY3 669 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Tubb4aQ9D6F9 444 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 FliiQ9JJ28 1271 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Dnai2A2AC93 623 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Cfap58B2RW38 873 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Trim55G3X8Y1 545 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 H2afxP27661 143 aaKnown RBP12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Tyro3P55144 880 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Irx1P81068 480 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 IntuQ059U7 942 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Myl10Q62082 202 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Dnaaf4Q8R368 420 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 SdsQ8VBT2 327 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Rbm43Q99J64 343 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Krt84Q99M73 603 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Rbm33Q9CXK9 1231 aaKnown RBP12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Hmgn5Q9JL35 406 aa12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Znfx1Q8R151 1909 aaKnown RBP12.11□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ccdc112A0AUP1 442 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Kansl3A2RSY1 903 aaKnown RBP12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ube4aE9Q735 1028 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Cyp26a1O55127 497 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Me1P06801 572 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Kcnd1Q03719 651 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Ccer1Q9CQL2 403 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Foxo3Q9WVH4 672 aa12.1□□□□□ -0.47
Ptpre-208ENSMUST00000211788 Sall1Q9ER74 1322 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms