RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 ZgpatQ8VDM1 511 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pde6cQ91ZQ1 861 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Myo1cQ9WTI7 1063 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Erich2E9Q1A6 463 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Lin9Q8C735 542 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Il1rapl2Q9ERS6 686 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Mapk8ip1Q9WVI9 707 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Atp12aQ9Z1W8 1035 aa10.14□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Zscan25B2RX31 543 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm10220K7N660 267 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm28047Q3US59 414 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Srek1ip1Q4V9W2 153 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pdzrn3Q69ZS0 1063 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Nap1l4Q78ZA7 375 aaKnown RBP10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 GopcQ8BH60 463 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rcn2Q8BP92 320 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Trim42Q9D2H5 723 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 SpertQ32MG2 446 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Leo1Q5XJE5 667 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Anks6Q6GQX6 883 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Triml1Q8BVP1 470 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 DroshaQ5HZJ0 1373 aaKnown RBP10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Kcnk16G5E845 292 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Casp8O89110 480 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pde11aP0C1Q2 933 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Jade3Q6IE82 823 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 SpopQ6ZWS8 374 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Tti2Q8BGV4 512 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Nol11Q8BJW5 723 aaKnown RBP10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pde5aQ8CG03 865 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pex19Q8VCI5 299 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cttnbp2nlQ99LJ0 638 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Dhx30Q99PU8 1217 aaKnown RBP10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ripk4Q9ERK0 786 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 1700006A11RikB9EHI3 544 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 MarcksP26645 309 aaKnown RBP10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Kifap3P70188 793 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Nkiras1Q8CEC5 192 aa10.13□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Arap1Q4LDD4 1452 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Speer2E9Q9U2 264 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Utp18Q5SSI6 552 aaKnown RBP10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Atp2a3Q64518 1038 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Mgea5Q9EQQ9 916 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Maml3D4QGC2 1135 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Serpinb6eI7HJI3 429 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Micall2Q3TN34 1009 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 SfswapQ3USH5 945 aaKnown RBP10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rab34Q64008 259 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ankrd6Q69ZU8 712 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 RbsnQ80Y56 783 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pih1h3bQ8C6P5 218 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Krt25Q8VCW2 446 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Tubgcp2Q921G8 905 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Asic2Q925H0 512 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Calml3Q9D6P8 149 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gdpd2Q9ESM6 539 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ddx24Q9ESV0 857 aaKnown RBP10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Homer2Q9QWW1 354 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Psma7Q9Z2U0 248 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 ScribQ80U72 1612 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Tiam1Q60610 1591 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 ChkbO55229 394 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Zfp51Q3U4L8 781 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Slc10a4Q3UEZ8 437 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ppp1r12bQ8BG95 976 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Klhl20Q8VCK5 604 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Chrna2Q91X60 512 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Zbtb43Q9DAI4 467 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cnpy2Q9QXT0 182 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm10110D3Z5M2 615 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 1700122O11RikJ3QPW6 241 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gnat3Q3V3I2 354 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Q8R1Y2 203 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 ErmapQ9JLN5 566 aa10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Noc2lQ9WV70 747 aaKnown RBP10.12□□□□□ -0.79
Ptpre-204ENSMUST00000209979 CadpsQ80TJ1 1355 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm5936A2BG95 728 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm5640A3KG49 728 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Rnf216P58283 853 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ell2Q3UKU1 639 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Arhgap30Q640N3 1101 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ddx42Q810A7 929 aaKnown RBP10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ranbp6Q8BIV3 1105 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Cabs1Q8C633 391 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Abhd8Q8R0P8 439 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ubac1Q8VDI7 409 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Mrps22Q9CXW2 359 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Xpo4Q9ESJ0 1151 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Atf7ipQ7TT18 1306 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Gm5624F6ZZG8 207 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Ppp1r9aH3BJD6 1292 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Bcap29Q61334 240 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Map3k7Q62073 579 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Slc26a7Q8R2Z3 656 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Mroh2bQ7M6Y6 1581 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Hcls1P49710 486 aaKnown RBP10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 PogzQ8BZH4 1409 aaKnown RBP10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Kif9Q9WV04 790 aa10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Eef1bO70251 225 aaKnown RBP10.11□□□□□ -0.79
Ptpre-204ENSMUST00000209979 Pcyt1aP49586 367 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms