RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Hspa2P17156 633 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ighmbp2P40694 993 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Tcp11l1Q8BTG3 509 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ubac1Q8VDI7 409 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 St5Q924W7 1134 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 E9QMW4 1145 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Nfil3O08750 462 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ctdspl2Q8BG15 465 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mei4Q8BRM6 389 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Clic4Q9QYB1 253 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gm28047Q3US59 414 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Krt15Q61414 452 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 PicalmQ7M6Y3 660 aaKnown RBP13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Dnm3Q8BZ98 863 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gucy1a3Q9ERL9 691 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Pus3Q9JI38 481 aa13.13□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Prl3d3A0A0M6L0J6 224 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ccdc24E9PUW8 296 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ppfibp2O35711 882 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Psmd1Q3TXS7 953 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ppp2r2cQ8BG02 447 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gli2Q0VGT2 1544 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 CltaO08585 235 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Dcaf17Q3TUL7 519 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Islr2Q5RKR3 745 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Esco1Q69Z69 843 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Fchsd1Q6PFY1 688 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Tpcn2Q8BWC0 731 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 GlmnQ8BZM1 596 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 RtcbQ99LF4 505 aaKnown RBP13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Acsl3Q9CZW4 720 aaKnown RBP13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 EhhadhQ9DBM2 718 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Orc1Q9Z1N2 840 aaKnown RBP13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Eif3j1Q3UGC7 261 aaKnown RBP13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Eif3j2Q66JS6 263 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Synpo2Q91YE8 1087 aaKnown RBP13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Six6os1Q9CTN5 574 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Phkg2Q9DB30 406 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ppp1r12cQ3UMT1 782 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mknk2Q8CDB0 459 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Olr1Q9EQ09 363 aa13.12□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Elmsan1E9Q2I4 1089 aaKnown RBP13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 TrdnE9Q9K5 693 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 SsbP32067 415 aaKnown RBP13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Madcam1Q61826 405 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Acbd3Q8BMP6 525 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Pola1P33609 1465 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Tex14Q7M6U3 1450 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Setd1bQ8CFT2 1985 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Aimp1P31230 310 aaKnown RBP13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Gas8Q60779 478 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Krt39Q6IFX4 482 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Arpp21Q9DCB4 807 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 PtprgQ05909 1442 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Eya2O08575 532 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Zdhhc9P59268 364 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Cnnm2Q3TWN3 875 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Itga6Q61739 1091 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Zmynd15Q8C0R7 736 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Tbc1d4Q8BYJ6 1307 aa13.11□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Qtrt2B8ZXI1 415 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Eif6O55135 245 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Chmp6P0C0A3 200 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 EmbP21995 330 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Kdm1aQ6ZQ88 853 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Bank1Q80VH0 783 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Epc1Q8C9X6 813 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Naa16Q9DBB4 864 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ppp1r9aH3BJD6 1292 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Agbl1Q09M05 972 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ppp1r7Q3UM45 361 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Cdcp1Q5U462 833 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Rapgef3Q8VCC8 918 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Hps3Q91VB4 1002 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Calml4Q91WQ9 153 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 ChmQ9QXG2 665 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Aox1O54754 1333 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ddx41Q91VN6 622 aaKnown RBP13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ifi35Q9D8C4 286 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mkrn1Q9QXP6 481 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Magi3Q9EQJ9 1476 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Prr16A3KMN5 304 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Pls1Q3V0K9 630 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Spag7Q7TNE3 227 aaKnown RBP13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Ehd2Q8BH64 543 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Shtn1Q8K2Q9 631 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Clip2Q9Z0H8 1047 aa13.1□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Plekhg2Q6KAU7 1340 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mapkapk5O54992 473 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Usp28Q5I043 1051 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Pde5aQ8CG03 865 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mettl5Q8K1A0 209 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Dnajc17Q91WT4 303 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Snrpa1P57784 255 aaKnown RBP13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Kctd16Q5DTY9 427 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 TfrcQ62351 763 aaKnown RBP13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Mcur1Q9CXD6 340 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Dbndd1Q9CZ00 160 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Tubb4aQ9D6F9 444 aa13.09□□□□□ -0.31
Ndc1-204ENSMUST00000139560 Sult6b1P0CC03 303 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms