RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Kank4Q6P9J5 1016 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Olfm5Q8BU90 496 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Cog5Q8C0L8 829 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Tshz3Q8CGV9 1081 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Slc44a4Q91VA1 707 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Trmt44Q9D2Q2 713 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Pus3Q9JI38 481 aa14.77□□□□□ -0.04
Trim50-202ENSMUST00000111180 Psme4Q5SSW2 1843 aa14.77□□□□□ -0.05
Trim50-202ENSMUST00000111180 Col20a1Q923P0 1320 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Smarce1O54941 411 aaKnown RBP14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 MycnP03966 462 aaKnown RBP14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 RubcnlQ3TD16 648 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Akap4Q60662 849 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Zcchc17Q9ESX4 241 aaKnown RBP14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Ddx20Q9JJY4 825 aaKnown RBP14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Mapkapk5O54992 473 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 ChgaP26339 463 aaKnown RBP14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Myo1bP46735 1107 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 LtbrP50284 415 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Hspd1P63038 573 aaKnown RBP14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Spata18Q0P557 537 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Lmbrd2Q8C561 694 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Atf7Q8R0S1 413 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Aldh1b1Q9CZS1 519 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Add2Q9QYB8 725 aa14.76□□□□□ -0.05
Trim50-202ENSMUST00000111180 Sirt2Q8VDQ8 389 aa14.75□□□□□ -0.05
Trim50-202ENSMUST00000111180 Lrrfip2Q91WK0 415 aa14.75□□□□□ -0.05
Trim50-202ENSMUST00000111180 RarsQ9D0I9 660 aaKnown RBP14.75□□□□□ -0.05
Trim50-202ENSMUST00000111180 NrapQ80XB4 1728 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 ArxO35085 564 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Prkg1P0C605 671 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Gnat2P50149 354 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Irf6P97431 467 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Tmed8Q3UHI4 326 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Tex2Q6ZPJ0 1128 aaKnown RBP14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Sgsm2Q80U12 1005 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Trim56Q80VI1 734 aaKnown RBP14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Cfap69Q8BH53 942 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Tmem179Q8BHH9 233 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Epc2Q8C0I4 808 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Kdm4cQ8VCD7 1054 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Tgm5Q9D7I9 724 aa14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Psma5Q9Z2U1 241 aaKnown RBP14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 Rbm6S4R1W5 1118 aaKnown RBP14.74□□□□□ -0.05
Trim50-202ENSMUST00000111180 FAM186AQ9D9R9 1790 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Frmd7A2AD83 703 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Pcdhb9E9Q5G2 828 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Fam83bQ0VBM2 1012 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Cyp24a1Q64441 514 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Ints3Q7TPD0 1041 aaKnown RBP14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Pxylp1Q8BHA9 480 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 NsmfQ99NF2 532 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Cxcl11Q9JHH5 100 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Mkrn1Q9QXP6 481 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Pcdh15Q99PJ1 1943 aa14.73□□□□□ -0.05
Trim50-202ENSMUST00000111180 Sik3Q6P4S6 1311 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Ugt1a5B2RT14 529 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 CrcpO35427 148 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Mansc4Q3UU94 337 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Slc10a5Q5PT54 434 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Slain1Q68FF7 579 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Usp44Q8C2S0 711 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Alx1Q8C8B0 326 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 ImmtQ8CAQ8 757 aaKnown RBP14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Rassf8Q8CJ96 419 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Cchcr1Q8K2I2 770 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 KinQ8K339 391 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 EhhadhQ9DBM2 718 aa14.72□□□□□ -0.05
Trim50-202ENSMUST00000111180 Arid4aF8VPQ2 1261 aaKnown RBP14.71□□□□□ -0.05
Trim50-202ENSMUST00000111180 Znf326O88291 580 aa14.71□□□□□ -0.05
Trim50-202ENSMUST00000111180 Fgl2P12804 432 aa14.71□□□□□ -0.05
Trim50-202ENSMUST00000111180 Snap47Q8R570 413 aa14.71□□□□□ -0.05
Trim50-202ENSMUST00000111180 Stag1Q9D3E6 1258 aa14.71□□□□□ -0.05
Trim50-202ENSMUST00000111180 Chd5A2A8L1 1946 aa14.71□□□□□ -0.05
Trim50-202ENSMUST00000111180 Fbxl16A2RT62 479 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Zbtb7aO88939 569 aaKnown RBP14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Hspa8P63017 646 aaKnown RBP14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Gjb2Q00977 226 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Map3k12Q60700 888 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Sez6lQ6P1D5 963 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Lmod1Q8BVA4 595 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Pcdhb5Q91XZ5 792 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Pla2g12bQ99P27 195 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Sept12Q9D451 317 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 B3galt4Q9Z0F0 371 aa14.7□□□□□ -0.06
Trim50-202ENSMUST00000111180 Kcnb2A6H8H5 907 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Phactr2B1AVP0 632 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Usp17ldG5E8G2 545 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Usp17lcG5E8I7 545 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Cyp2d9P11714 504 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Traf5P70191 558 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Esyt2Q3TZZ7 845 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 SfswapQ3USH5 945 aaKnown RBP14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 ErmnQ5EBJ4 281 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Secisbp2lQ6A098 1086 aaKnown RBP14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Rnf181Q9CY62 165 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Bcs1lQ9CZP5 418 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Ccdc7Q9D541 371 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Tmem79Q9D709 391 aa14.69□□□□□ -0.06
Trim50-202ENSMUST00000111180 Cyp27a1Q9DBG1 533 aa14.69□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms