RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Ift172Q6VH22 1749 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Kif1aP33173 1695 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Sdc2P43407 202 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Tfcp2Q9ERA0 502 aa15.38■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Sept9Q80UG5 583 aa15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Tbc1d2bQ3U0J8 965 aa15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Znf496Q5SXI5 585 aa15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Paxip1Q6NZQ4 1056 aa15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Eaf2Q91ZD6 262 aa15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Spata18Q0P557 537 aa15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Afg3l2Q8JZQ2 802 aaKnown RBP15.37■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ms4a2P20490 235 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Bach1P97302 739 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ccdc174Q3U155 467 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Gm5592Q3V0A6 857 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Mmel1Q9JLI3 765 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Prpf38aQ4FK66 312 aaKnown RBP15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Tacc1Q6Y685 774 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ccdc172Q810N9 267 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Plekhg2Q6KAU7 1340 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 TrdnE9Q9K5 693 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Plcd1Q8R3B1 756 aa15.36■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Aox1O54754 1333 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Akr1c19G3X9Y6 323 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Calm1P0DP26 149 aaKnown RBP15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Calm2P0DP27 149 aaKnown RBP15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Calm3P0DP28 149 aaKnown RBP15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 GnaqP21279 359 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 MarcksP26645 309 aaKnown RBP15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Slu7Q8BHJ9 585 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Bola3Q8CEI1 110 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Suclg2Q9Z2I8 433 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Olfr247E9PVJ7 320 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Olfr819K7N727 320 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Tyro3P55144 880 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Stim1P70302 685 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Znf667Q2TL60 609 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ankrd13aQ80UP5 588 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Hip1rQ9JKY5 1068 aa15.35■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Sun3Q5SS91 320 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ces1dQ8VCT4 565 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Hdac9Q99N13 588 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Ccdc7Q9D541 371 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Baiap2l1Q9DBJ3 514 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Mdc1Q5PSV9 1707 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Stx1aO35526 288 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Gnl2Q99LH1 728 aaKnown RBP15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Sumf1Q8R0F3 372 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Mst1rQ62190 1378 aa15.34■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Gm20425E9Q035 978 aaKnown RBP15.33■□□□□ 0.05
Clcn3-204ENSMUST00000110301 SrprbP47758 269 aa15.33■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Cxcl11Q9JHH5 100 aa15.33■□□□□ 0.05
Clcn3-204ENSMUST00000110301 Kif22Q3V300 660 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Kif20bQ80WE4 1774 aaKnown RBP15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Krt24A1L317 512 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 MthfslL7N466 203 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Spef2Q8C9J3 1734 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Strip1Q8C079 837 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Eid1Q9DCR4 169 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Plagl1Q9JLQ4 704 aa15.33■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Col20a1Q923P0 1320 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 MetP16056 1379 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Usp53P15975 1069 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 1700013D24RikQ0P521 120 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Pex1Q5BL07 1284 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 2310002L09RikQ9D7L5 217 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Atp8b3Q6UQ17 1335 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 NefhP19246 1090 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Olfr118Q7TRJ6 321 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Crb1Q8VHS2 1405 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Frmd3Q8BHD4 595 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Trmt44Q9D2Q2 713 aa15.32■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Snapc4Q8BP86 1333 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Oxr1Q4KMM3 866 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Phf23Q8BSN5 401 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Chd2E9PZM4 1827 aaKnown RBP15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Sipa1l1Q8C0T5 1782 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Slc39a11Q8BWY7 342 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 HibadhQ99L13 335 aaKnown RBP15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Topaz1E5FYH1 1653 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Lamb3Q61087 1168 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Cdca8Q8BHX3 289 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Cfap45Q9D9U9 551 aa15.31■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Odf2A3KGV1 830 aaKnown RBP15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Ubxn10Q8BG34 277 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Usp44Q8C2S0 711 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Gimap7Q8R379 293 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Eya3P97480 510 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Add2Q9QYB8 725 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Slit1Q80TR4 1531 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Nod2Q8K3Z0 1020 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Gtf2a1Q99PM3 378 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Dynll2Q9D0M5 89 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Col4a3bpQ9EQG9 624 aa15.3■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Rimbp3Q3V0F0 1606 aa15.29■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Copb2O55029 905 aa15.29■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Cd3dP04235 173 aa15.29■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Mx1P09922 631 aa15.29■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Sp4Q62445 782 aa15.29■□□□□ 0.04
Clcn3-204ENSMUST00000110301 Cul5Q9D5V5 780 aa15.29■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 170.4 ms