RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Kdm3aQ6PCM1 1323 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Tnrc6cQ3UHC0 1690 aaKnown RBP13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Casz1Q9CWL2 1761 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Irx2P81066 474 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Znf532Q6NXK2 1036 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Mylk2Q8VCR8 613 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Mtmr6Q8VE11 617 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Zbtb1Q91VL9 713 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Tubgcp2Q921G8 905 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ankrd1Q9CR42 319 aa13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Rbm33Q9CXK9 1231 aaKnown RBP13.24□□□□□ -0.29
Vps54-202ENSMUST00000109578 Plcb3P51432 1234 aaKnown RBP13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Mast3Q3U214 1321 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Arhgef16Q3U5C8 713 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 NenfQ9CQ45 171 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 BccipQ9CWI3 316 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Krt24A1L317 512 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 NapbP28663 298 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Cplx2P84086 134 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Vps33aQ9D2N9 598 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Efcc1Q9JJF6 558 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Tulp1Q9Z273 543 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Krt39Q6IFX4 482 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Usp49Q6P9L4 685 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Vps18Q8R307 973 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Rbm43Q99J64 343 aa13.23□□□□□ -0.29
Vps54-202ENSMUST00000109578 Pard3Q99NH2 1333 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 HdgfP51859 237 aaKnown RBP13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Cep63Q3UPP8 700 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Cdkl5Q3UTQ8 938 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Dpf2Q61103 391 aaKnown RBP13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Col18a1P39061 1774 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Paxbp1P58501 919 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Dcaf5Q80T85 946 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Slitrk3Q810B9 980 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Krt84Q99M73 603 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Jakmip2D3YXK0 820 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Hap1O35668 628 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Zbtb7aO88939 569 aaKnown RBP13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Clic6Q8BHB9 596 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Mroh6V9GX81 722 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Myh1Q5SX40 1942 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ces1hD3Z298 562 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Gm5624F6ZZG8 207 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 CrcpO35427 148 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 GmnnO88513 206 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Vps16Q920Q4 839 aa13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Polr2dQ9D7M8 142 aaKnown RBP13.22□□□□□ -0.29
Vps54-202ENSMUST00000109578 Sycp2lA0A0M3U1B0 842 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Kcnd1Q03719 651 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ccdc174Q3U155 467 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Klhl30Q8C3F7 581 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Riok1Q922Q2 567 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Dctpp1Q9QY93 170 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Med23Q80YQ2 1367 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Ift122Q6NWV3 1182 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Tcp11l1Q8BTG3 509 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Pold4Q9CWP8 107 aa13.21□□□□□ -0.29
Vps54-202ENSMUST00000109578 Tnni2P13412 182 aa13.21□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ccdc47Q9D024 483 aaKnown RBP13.21□□□□□ -0.3
Vps54-202ENSMUST00000109578 Pik3ap1Q9EQ32 811 aa13.21□□□□□ -0.3
Vps54-202ENSMUST00000109578 Hdac6Q9Z2V5 1149 aa13.21□□□□□ -0.3
Vps54-202ENSMUST00000109578 Cdhr2E9Q7P9 1308 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Casp12O08736 419 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Myo1bP46735 1107 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Gtf2f1Q3THK3 508 aaKnown RBP13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Pex1Q5BL07 1284 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Trim25Q61510 634 aaKnown RBP13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 IqcgQ80W32 419 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Etf1Q8BWY3 437 aaKnown RBP13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Sox30Q8CGW4 782 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Wdr64Q9D565 1086 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Tfcp2Q9ERA0 502 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Popdc2Q9ES82 367 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Dnajc5P60904 198 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 ErmnQ5EBJ4 281 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ankrd40Q5SUE8 363 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Myh2G3UW82 1942 aa13.2□□□□□ -0.3
Vps54-202ENSMUST00000109578 Trim34bJ3QNR8 485 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Pla2g4bP0C871 782 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ccdc102aQ3TMW1 549 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Luc7l2Q7TNC4 392 aaKnown RBP13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Otop3Q80UF9 577 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Foxo4Q9WVH3 505 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Serpinb6bO08804 377 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Plekhf1Q3TB82 279 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Cadps2Q8BYR5 1297 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Slc4a4O88343 1079 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Actn3O88990 900 aaKnown RBP13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Foxp1P58462 705 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Uri1Q3TLD5 531 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Cyp7b1Q60991 507 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Setdb1O88974 1307 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Abl1P00520 1123 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Sh3bp1P55194 680 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Abcf1Q6P542 837 aaKnown RBP13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Pnpla2Q8BJ56 486 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 Trim11Q99PQ2 467 aa13.19□□□□□ -0.3
Vps54-202ENSMUST00000109578 C87499Q3UX49 493 aa13.18□□□□□ -0.3
Vps54-202ENSMUST00000109578 Ube3cQ80U95 1083 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms