RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Ccdc60Q8C4J0 545 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Ciao1Q99KN2 339 aa13.58□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Ccdc171E9Q1U1 1324 aa13.57□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Kdm3aQ6PCM1 1323 aa13.57□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Izumo3A6PWV3 263 aa13.57□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Eya2O08575 532 aa13.57□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Cacnb3P54285 484 aa13.57□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Spint1Q9R097 507 aa13.57□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Gm3893E9Q1I1 302 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Cyp2c37P56654 490 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 SelpQ01102 768 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Cyp2c54Q6XVG2 490 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Usp33Q8R5K2 909 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Cyp2c50Q91X77 490 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Capn10Q9ESK3 666 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Znhit2Q9QY66 399 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Igsf9bE9PZ19 1328 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Palm3A2TJV2 734 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Oog1E9Q5G7 496 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 YdjcQ14BV6 310 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 MarsQ68FL6 902 aaKnown RBP13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Plekhm2Q80TQ5 1018 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Zswim3Q8CFL8 695 aa13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 PfkpQ9WUA3 784 aaKnown RBP13.56□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Gm44503E9PYU5 387 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 B020004C17RikJ3QP07 232 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Jarid2Q62315 1234 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Dnaaf4Q8R368 420 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Atrnl1Q6A051 1378 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Rnf19bA2A7Q9 732 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Mapkapk5O54992 473 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Slc27a3O88561 667 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 FlgP11088 336 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Eps15P42567 897 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Eif5P59325 429 aaKnown RBP13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Samd11Q1RNF8 542 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Ppp1r21Q3TDD9 780 aa13.55□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Plekhg2Q6KAU7 1340 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 AppP12023 770 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 PrkczQ02956 592 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Fsd2Q8BZ52 692 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Q8C5K5 320 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 NsmfQ99NF2 532 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 OgdhlE9Q7L0 1029 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Sult6b1P0CC03 303 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Noc3lQ8VI84 807 aaKnown RBP13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Trim26Q99PN3 545 aa13.54□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Pus7B7ZNL8 666 aaKnown RBP13.53□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Tmco5bQ80X59 307 aa13.53□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Phf20l1Q8CCJ9 1013 aa13.53□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Jag1Q9QXX0 1218 aa13.53□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Sbf1Q6ZPE2 1867 aa13.53□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Pagr1bF6V0H0 108 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Hsp90b1P08113 802 aaKnown RBP13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Lamp1P11438 406 aaKnown RBP13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 GclcP97494 637 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 G3bp1P97855 465 aaKnown RBP13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Atp2b3Q0VF55 1220 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Garem2Q6PAJ3 880 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Spata7Q80VP2 582 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Mak16Q8BGS0 296 aaKnown RBP13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Tmem87bQ8BKU8 555 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Ric3Q8BPM6 367 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Ero1aQ8R180 464 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 HdlbpQ8VDJ3 1268 aaKnown RBP13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Pagr1aQ99L02 253 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Txnrd3Q99MD6 652 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Katnbl1Q9CWJ3 299 aa13.52□□□□□ -0.24
Ccdc60-202ENSMUST00000086483 Flvcr1B2RXV4 560 aa13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Rangap1P46061 589 aaKnown RBP13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Crhr2Q60748 411 aa13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Slc9c1Q6UJY2 1175 aa13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Ankrd13aQ80UP5 588 aa13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Snapc2Q91XA5 359 aa13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Mei1Q9D4I2 1268 aa13.52□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Sept1P42209 366 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Btbd1P58544 488 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Ptpn18Q61152 453 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Sv2cQ69ZS6 727 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Dcaf15Q6PFH3 600 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Rbm15bQ6PHZ5 887 aaKnown RBP13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Uba5Q8VE47 403 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Elp3Q9CZX0 547 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 PtpraP18052 829 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Nectin2P32507 530 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 CalcaP70160 136 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Atp9bP98195 1146 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Tbc1d2bQ3U0J8 965 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Znf692Q3U381 531 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Smc1bQ920F6 1248 aa13.51□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Kntc1Q8C3Y4 2207 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Trim5E9PV98 497 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Pla2g5P97391 137 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Olfm4Q3UZZ4 505 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Mrs2Q5NCE8 434 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Atg9aQ68FE2 551 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Ccdc30Q8BVF4 654 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Ift57Q8BXG3 429 aa13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Ddx50Q99MJ9 734 aaKnown RBP13.5□□□□□ -0.25
Ccdc60-202ENSMUST00000086483 Acap3Q6NXL5 833 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms