RNA–Protein interactions for RNA: ENSMUST00000074679.3

Sh3rf2-202, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf2, Length 4,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-202ENSMUST00000074679 CtcfQ61164 736 aaKnown RBP8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Trim25Q61510 634 aaKnown RBP8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Strip1Q8C079 837 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Stk38Q91VJ4 465 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Tktl2Q9D4D4 627 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ccdc39Q9D5Y1 937 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Olr1Q9EQ09 363 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Atp6v1aP50516 617 aaKnown RBP8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Snai1Q02085 264 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Mex3cQ05A36 652 aaKnown RBP8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Otud6bQ8K2H2 294 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Mrps25Q9D125 171 aaKnown RBP8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Akt1s1Q9D1F4 257 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 IncenpQ9WU62 880 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Spata31d1bE9QA57 1361 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Snapc4Q8BP86 1333 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Nap1l1P28656 391 aaKnown RBP8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 L1td1Q587J6 782 aaKnown RBP8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Atg9aQ68FE2 551 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Fam193aQ8CGI1 1231 aaKnown RBP8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Zbtb43Q9DAI4 467 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Zfp142G5E869 1843 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ugt1a5B2RT14 529 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sept1P42209 366 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Anp32eP97822 260 aaKnown RBP8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ddx27Q921N6 760 aaKnown RBP8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 SetQ9EQU5 289 aaKnown RBP8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Fbxo41Q6NS60 873 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Larp6Q8BN59 492 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Nup133Q8R0G9 1155 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Shank2Q80Z38 1476 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Myo3bQ1EG27 1305 aa8.37□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cyp3a57D3YYZ0 503 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Npy5rO70342 466 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Stat1P42225 749 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sh3bp1P55194 680 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Dok7Q18PE0 504 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cnnm2Q3TWN3 875 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Leo1Q5XJE5 667 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kcnf1Q7TSH7 493 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 McamQ8R2Y2 648 aaKnown RBP8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Tuft1O08970 390 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Csrnp1P59054 583 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ppil4Q9CXG3 492 aaKnown RBP8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Palm3A2TJV2 734 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ttc12Q8BW49 704 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Dnajc14Q921R4 703 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 CenpqQ9CPQ5 267 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Fam114a1Q9D281 569 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cyp24a1Q64441 514 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Tbc1d31Q6NXY1 996 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Zfp397Q7TNK4 527 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Srgap1Q91Z69 1062 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ccdc7Q9D541 371 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Osbpl5Q9ER64 874 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cdc45Q9Z1X9 566 aa8.36□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Serpinb6bO08804 377 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ms4a2P20490 235 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 FanccP50652 591 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ccdc162pQ0VG85 912 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Limch1Q3UH68 1057 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 FliiQ9JJ28 1271 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Mrvi1Q9WUX5 899 aaKnown RBP8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Olfr247E9PVJ7 320 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Olfr819K7N727 320 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Eif5P59325 429 aaKnown RBP8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Oxsr1Q6P9R2 527 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sumf1Q8R0F3 372 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Nap1l5Q9JJF0 156 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Gdf11Q9Z1W4 405 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 CoblQ5NBX1 1337 aaKnown RBP8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ercc6lQ8BHK9 1240 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ift74Q8BKE9 600 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Vps18Q8R307 973 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 OscarQ8VBT3 265 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sf3b3Q921M3 1217 aaKnown RBP8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Gnl2Q99LH1 728 aaKnown RBP8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Popdc2Q9ES82 367 aa8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Add3Q9QYB5 706 aaKnown RBP8.35□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ccdc102aQ3TMW1 549 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sgsm2Q80U12 1005 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Rps6kb1Q8BSK8 525 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 ParnQ8VDG3 624 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Pcdhb5Q91XZ5 792 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Nol7Q9D7Z3 254 aaKnown RBP8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kcnq5Q9JK45 933 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kansl3A2RSY1 903 aaKnown RBP8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Zscan20B2KFW1 1030 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Prl7a2O54831 253 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Pip4k2aO70172 405 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 NefhP19246 1090 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Rtkn2Q14B46 604 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ppp1r10Q80W00 888 aaKnown RBP8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sptlc3Q8BG54 563 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Col20a1Q923P0 1320 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Hspd1P63038 573 aaKnown RBP8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ncf1Q09014 390 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kif22Q3V300 660 aa8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Igf2bp2Q5SF07 592 aaKnown RBP8.34□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cul5Q9D5V5 780 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms