RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Rps8P62242 208 aaKnown RBP13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Lig3P97386 1015 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Ppp6r3Q922D4 844 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Smc3Q9CW03 1217 aaKnown RBP13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Myh4Q5SX39 1939 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 1700029H14RikE9PY36 240 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Gja5Q01231 358 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Dpf2Q61103 391 aaKnown RBP13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Znf653Q6YND2 615 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Fam53cQ8BXQ8 393 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Ccdc73Q8CDM4 1066 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Carmil3Q3UFQ8 1375 aa13.91□□□□□ -0.18
Upk3b-201ENSMUST00000062606 NrapQ80XB4 1728 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Hmx1O70218 332 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Nfe2l3Q9WTM4 660 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Lgr5Q9Z1P4 907 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Col1a1P11087 1453 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Gpr182P43142 395 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Adcy2Q80TL1 1090 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Suds3Q8BR65 328 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Gtpbp10Q8K013 366 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 4930550L24RikQ99PA7 320 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Tomm22Q9CPQ3 142 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Q9D1Z2 194 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Tpd52l1O54818 204 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 GabrdP22933 449 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Il17raQ60943 864 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Ift57Q8BXG3 429 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Snx1Q9WV80 522 aa13.9□□□□□ -0.18
Upk3b-201ENSMUST00000062606 Atg4a-psA0A0G2JFS9 396 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm7347D3YYI9 267 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Speer4aF8VPX6 267 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Smarce1O54941 411 aaKnown RBP13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Nucb1Q02819 459 aaKnown RBP13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Abtb2Q7TQI7 1024 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Kcnf1Q7TSH7 493 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Slc39a11Q8BWY7 342 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Atg4aQ8C9S8 396 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Ciapin1Q8WTY4 309 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Slc5a4aQ9ET37 656 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Tbc1d8Q9Z1A9 1134 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Scn9aQ62205 1984 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Pde8bE9Q4S1 865 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 NeblQ0II04 452 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Slc4a10Q5DTL9 1118 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 HdlbpQ8VDJ3 1268 aaKnown RBP13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Trim11Q99PQ2 467 aa13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Zcchc17Q9ESX4 241 aaKnown RBP13.89□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Magea6O89010 325 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Pax3P24610 479 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Ddx49Q4FZF3 480 aaKnown RBP13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Magea3Q6T340 320 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Pdzph1Q8BGR1 1238 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Mta1Q8K4B0 715 aaKnown RBP13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Mmel1Q9JLI3 765 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gsdma2Q32M21 443 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Esyt3Q5DTI8 891 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Cyp2ab1S4R196 498 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 NynrinQ5DTZ0 1840 aa13.88□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Ccdc112A0AUP1 442 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Bin2D3Z6Q9 489 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 RdxP26043 583 aaKnown RBP13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Pdia3P27773 505 aaKnown RBP13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Tmem266Q8BZB3 538 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Scnn1bQ9WU38 638 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Ppp2r3dQ9Z176 491 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 D830030K20RikE9PYQ5 218 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm3043K7N693 218 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm16440K7N6G6 218 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm2244L7N2A3 218 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm3278L7N2D2 218 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm8271L7N2E2 218 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Tpm1P58771 284 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 CbarpQ66L44 698 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 PrimpolQ6P1E7 537 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Ssh3Q8K330 649 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Naa16Q9DBB4 864 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Utp3Q9JI13 469 aaKnown RBP13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 AfdnQ9QZQ1 1820 aaKnown RBP13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Atad2Q8CDM1 1040 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Cypt1Q8CH20 168 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Glrx3Q9CQM9 337 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 FanclQ9CR14 375 aa13.87□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Gm4340L7N2C4 268 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Oxsr1Q6P9R2 527 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Asap2Q7SIG6 958 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Sgip1Q8VD37 806 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Setdb1O88974 1307 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 A0A1L1SQF0 893 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Sept1P42209 366 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 CebpzP53569 1052 aaKnown RBP13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Zfp51Q3U4L8 781 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Cpa2Q504N0 417 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 ZyxQ62523 564 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Nme8Q715T0 586 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Dis3l2Q8CI75 870 aaKnown RBP13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Akr1e2Q9DCT1 301 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 CalcaP70160 136 aa13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Mrps27Q8BK72 415 aaKnown RBP13.86□□□□□ -0.19
Upk3b-201ENSMUST00000062606 Atp1a4Q9WV27 1032 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms