RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Mdm2P23804 489 aa12.8□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Sptlc2P97363 560 aaKnown RBP12.8□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Ccdc129Q14B48 1034 aa12.8□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Tmx3Q8BXZ1 456 aa12.8□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 SfpqQ8VIJ6 699 aaKnown RBP12.8□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Pcdhb2Q91Y00 799 aa12.8□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Frmpd4A2AFR3 1320 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 NmiO35309 314 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 VrtnQ3SYK4 740 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 AbraQ8BUZ1 375 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Amhr2Q8K592 568 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Ccdc94Q9D6J3 314 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Plcb3P51432 1234 aaKnown RBP12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Sema3eP70275 775 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Thrap3Q569Z6 951 aaKnown RBP12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Ift88Q61371 824 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Haus6Q6NV99 933 aaKnown RBP12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Asic1Q6NXK8 526 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Zscan18E9PUD6 809 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Zscan29E9Q5B4 869 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Znf652Q5DU09 608 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 NfkbibQ60778 359 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Arhgef18Q6P9R4 1021 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Strip1Q8C079 837 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Rbm19Q8R3C6 952 aaKnown RBP12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Gm30191A0A0U1RNT7 187 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 LdhbP16125 334 aaKnown RBP12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Stag1Q9D3E6 1258 aa12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Usp14Q9JMA1 493 aaKnown RBP12.79□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Ctr9Q62018 1173 aaKnown RBP12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Afg3l2Q8JZQ2 802 aaKnown RBP12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 CpvlQ9D3S9 478 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Dot1lQ6XZL8 1540 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Gadd45bP22339 160 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Serpinc1P32261 465 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Mcm6P97311 821 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Prm3Q62100 101 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Exoc1Q8R3S6 894 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Hps4Q99KG7 671 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Ccdc170D3YXL0 722 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Znf394Q9Z1D9 521 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Col1a2Q01149 1372 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Setdb1O88974 1307 aa12.78□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 SsbP32067 415 aaKnown RBP12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Rhpn1Q61085 643 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Brd3Q8K2F0 726 aaKnown RBP12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Dph6Q9CQ28 267 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Syt10Q9R0N4 523 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Fhod3Q76LL6 1578 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Il4rP16382 810 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 GalcP54818 684 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Chl1P70232 1209 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Hace1Q3U0D9 909 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Large2Q5XPT3 690 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Elf1Q60775 612 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 RestQ8VIG1 1082 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Grpel1Q99LP6 217 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Pik3ap1Q9EQ32 811 aa12.77□□□□□ -0.36
Pcdhb17-201ENSMUST00000053856 Zbtb21E9Q444 1094 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Mapkapk5O54992 473 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Tyro3P55144 880 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Timm10P62073 90 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Kiaa0319Q5SZV5 1081 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Tmem87aQ8BXN9 555 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Acot11Q8VHQ9 594 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 NhsB1AV60 1647 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Abca8bQ8K440 1620 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Oas2E9Q9A9 742 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Rnaseh1O70338 285 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Dync1i1O88485 628 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Map2k1P31938 393 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Dclk3Q8BWQ5 790 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Kiaa1024Q8K3V7 917 aa12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Tnpo2Q99LG2 887 aaKnown RBP12.77□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 FosP01101 380 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Q4VA45 678 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Spata21Q8BHW6 681 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Ano1Q8BHY3 960 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Bbs5Q9CZQ9 341 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Gbp8Q2V6D6 525 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Prpf38aQ4FK66 312 aaKnown RBP12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Nsrp1Q5NCR9 542 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Als2cr12Q8BVM7 383 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Tceanc2Q8R2M0 207 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Serpinb3bQ9D1Q5 387 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Uso1Q9Z1Z0 959 aaKnown RBP12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Arid3aQ62431 601 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Dcaf15Q6PFH3 600 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Tti2Q8BGV4 512 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Vps16Q920Q4 839 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Fam76aQ922G2 307 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Mbd5B1AYB6 1498 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Kif2aP28740 705 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Rps6kb1Q8BSK8 525 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Zmynd15Q8C0R7 736 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Msantd4Q91YU3 345 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Tnfrsf10bQ9QZM4 381 aa12.76□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Kcnh4A2A5F7 1018 aa12.75□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Gm10378F6XQQ1 160 aa12.75□□□□□ -0.37
Pcdhb17-201ENSMUST00000053856 Esr2O08537 530 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms