RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Lipo1J3QME6 396 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Slc1a4O35874 532 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Cplx1P63040 134 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Slc44a1Q6X893 653 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Frat2Q8K025 231 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Q8K2W9 541 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Krt84Q99M73 603 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Vnn1Q9Z0K8 512 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Snapc4Q8BP86 1333 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Atp8b5A3FIN4 1183 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Zfp597E9Q6S0 419 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Sept1P42209 366 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Tdo2P48776 406 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Samsn1P57725 372 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Rassf4Q8CB96 322 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Paf1Q8K2T8 535 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Mast3Q3U214 1321 aa18.54■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Nbr1P97432 988 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Asnsd1Q8BFS9 627 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Wasf1Q8R5H6 559 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ddx27Q921N6 760 aaKnown RBP18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Emilin1Q99K41 1017 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 ChmQ9QXG2 665 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Me1P06801 572 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 LtkP08923 888 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 L1td1Q587J6 782 aaKnown RBP18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Trak2Q6P9N8 913 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ranbp6Q8BIV3 1105 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Haus7Q8BKT8 364 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Chrna2Q91X60 512 aa18.53■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Cfap44E9Q5M6 1843 aa18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Fkbp1aP26883 108 aaKnown RBP18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Plbd2Q3TCN2 594 aa18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Llgl2Q3TJ91 1027 aa18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Sirt2Q8VDQ8 389 aa18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Trim11Q99PQ2 467 aa18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Kcnh3Q9WVJ0 1095 aa18.52■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ssc5dQ8BV57 1371 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Dnm1P39053 867 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Plekhf1Q3TB82 279 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Clec16aQ80U30 1036 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ehd2Q8BH64 543 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Tom1O88746 492 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 EmbP21995 330 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 HdgfP51859 237 aaKnown RBP18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Cnnm2Q3TWN3 875 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Mns1Q61884 491 aa18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Luc7l2Q7TNC4 392 aaKnown RBP18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Enox1Q8BHR2 643 aaKnown RBP18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Zranb2Q9R020 330 aaKnown RBP18.51■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Frmd7A2AD83 703 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Pde8bE9Q4S1 865 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 SsbP32067 415 aaKnown RBP18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Gas2l3Q3UWW6 683 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Prl2c1Q5SVL9 228 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Olfr119Q7TRJ5 321 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Sptlc3Q8BG54 563 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 DymQ8CHY3 669 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Tada3Q8R0L9 432 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Fam76aQ922G2 307 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Atp12aQ9Z1W8 1035 aa18.5■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Acad12D3Z7X0 555 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Specc1lQ2KN98 1118 aaKnown RBP18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ccdc174Q3U155 467 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Prdm1Q60636 856 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Prpf4bQ61136 1007 aaKnown RBP18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Acap3Q6NXL5 833 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Gtpbp4Q99ME9 634 aaKnown RBP18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ankrd31A0A140LI88 1765 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Slc38a10Q5I012 1090 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Cep120Q7TSG1 988 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Hps6Q8BLY7 805 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Fam43aQ8BUP8 424 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Tspyl4Q8VD63 406 aa18.49■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Pde4bB1AWC9 736 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ccdc191J3QQ27 883 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Cops6O88545 324 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ccdc102aQ3TMW1 549 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Eaf2Q91ZD6 262 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Cap2Q9CYT6 476 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Abcb6Q9DC29 842 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Foxo4Q9WVH3 505 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Gm11983V9GXS8 105 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Kndc1Q0KK55 1742 aa18.48■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Gm5624F6ZZG8 207 aa18.47■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Smg7Q5RJH6 1138 aaKnown RBP18.47■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ppp2r2cQ8BG02 447 aa18.47■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 GptQ8QZR5 496 aa18.47■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 MetP16056 1379 aa18.47■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Myh1Q5SX40 1942 aa18.47■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 A0A1L1SQF0 893 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Kmt5bQ3U8K7 883 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Ercc6lQ8BHK9 1240 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Klhl30Q8C3F7 581 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Kcnq3Q8K3F6 873 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Txnrd1Q9JMH6 613 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Myh2G3UW82 1942 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Gm4340L7N2C4 268 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Tpm4Q6IRU2 248 aa18.46■□□□□ 0.55
Ttc39b-202ENSMUST00000048274 Iqcb1Q8BP00 598 aa18.46■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 59.7 ms