RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Cep89Q9CZX2 791 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 LyarQ08288 388 aaKnown RBP10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Chrna5Q2MKA5 467 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Atg9aQ68FE2 551 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ccdc82Q6PG04 518 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 OscarQ8VBT3 265 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Nrbp1Q99J45 535 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Dph6Q9CQ28 267 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Col16a1Q8BLX7 1580 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Plekhg2Q6KAU7 1340 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Nphp3Q7TNH6 1325 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Plcb3P51432 1234 aaKnown RBP10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Vars2Q3U2A8 1060 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cyp2c67Q569X9 491 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Atp2b4Q6Q477 1205 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Sipa1l2Q80TE4 1722 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ankrd13aQ80UP5 588 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Fam193aQ8CGI1 1231 aaKnown RBP10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 RabggtaQ9JHK4 567 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Clip2Q9Z0H8 1047 aa10.68□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Serpinb6bO08804 377 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Rps6kb1Q8BSK8 525 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Foxo4Q9WVH3 505 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Alpk3Q924C5 1678 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 NfixP70257 488 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Spata18Q0P557 537 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Acnat2Q8BGG9 420 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 McamQ8R2Y2 648 aaKnown RBP10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Iqca1Q9CUL5 857 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Stag1Q9D3E6 1258 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Mdc1Q5PSV9 1707 aa10.67□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Lbhd1A0A087WPA0 259 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Prr16A3KMN5 304 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Lnx1O70263 728 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Sept1P42209 366 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 HlfQ8BW74 295 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Smc2Q8CG48 1191 aaKnown RBP10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Srgap1Q91Z69 1062 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Vps16Q920Q4 839 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Mroh6V9GX81 722 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Scn4aQ9ER60 1841 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Pcdhb9E9Q5G2 828 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cacnb3P54285 484 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Paxbp1P58501 919 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Slc38a10Q5I012 1090 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Gpr101Q80T62 511 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Slc39a11Q8BWY7 342 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Luzp1Q8R4U7 1068 aaKnown RBP10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 CpzQ8R4V4 654 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Crb1Q8VHS2 1405 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Cyp3a57D3YYZ0 503 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Slc4a1P04919 929 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 FanccP50652 591 aa10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Mrpl44Q9CY73 333 aaKnown RBP10.66□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Copb2O55029 905 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Hmgb2P30681 210 aaKnown RBP10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Stat5bP42232 786 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 1810065E05RikQ5NC41 235 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Spag5Q7TME2 1165 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ppp1r10Q80W00 888 aaKnown RBP10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Dnaaf4Q8R368 420 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Brpf3B2KF05 1204 aaKnown RBP10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Nfil3O08750 462 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Kif2aP28740 705 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 VrtnQ3SYK4 740 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Kcnf1Q7TSH7 493 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Xrcc4Q924T3 326 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Ciao1Q99KN2 339 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Stxbp4Q9WV89 557 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Usp53P15975 1069 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Fam198bQ3UPI1 517 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Lamb3Q61087 1168 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Mns1Q61884 491 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Sgsm2Q80U12 1005 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Vps37dQ810I0 261 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 FliiQ9JJ28 1271 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Nfe2l3Q9WTM4 660 aa10.65□□□□□ -0.7
Rnf43-201ENSMUST00000040089 Pnpla7A2AJ88 1352 aa10.65□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Dnajc25A2ALW5 357 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Leo1Q5XJE5 667 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Znf219Q6IQX8 726 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 AbraQ8BUZ1 375 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ddx27Q921N6 760 aaKnown RBP10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Krt24A1L317 512 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Kif23E9Q5G3 953 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Gm5592Q3V0A6 857 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Igf2bp2Q5SF07 592 aaKnown RBP10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Sp4Q62445 782 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tacc1Q6Y685 774 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Strip1Q8C079 837 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Mtmr2Q9Z2D1 643 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Snai1Q02085 264 aa10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Arglu1Q3UL36 271 aaKnown RBP10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ezh2Q61188 746 aaKnown RBP10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 CtifQ6PEE2 600 aaKnown RBP10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ddx41Q91VN6 622 aaKnown RBP10.64□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Ccdc112A0AUP1 442 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Frat1P70339 274 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Tbc1d2bQ3U0J8 965 aa10.63□□□□□ -0.71
Rnf43-201ENSMUST00000040089 Kmt5bQ3U8K7 883 aa10.63□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms