RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Brd3Q8K2F0 726 aaKnown RBP15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 BaatQ91X34 420 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ciao1Q99KN2 339 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Tubb4aQ9D6F9 444 aa15.44■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ovgp1Q62010 721 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Vps37dQ810I0 261 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 NenfQ9CQ45 171 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Pla2g4bP0C871 782 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Gtf3c5Q8R2T8 520 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Farp2Q91VS8 1065 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ssfa2Q922B9 1252 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 EcsitQ9QZH6 435 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Abca3Q8R420 1704 aa15.43■□□□□ 0.06
Nup88-201ENSMUST00000035283 Dhx8A2A4P0 1244 aaKnown RBP15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ankrd40Q5SUE8 363 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Tbx2Q60707 711 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 4930572O03RikQ8C5Y0 211 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Cd209bQ8CJ91 325 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ppp4r3bQ922R5 820 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Cyp3a59D3Z2W7 503 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Pde6aP27664 859 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Drc7Q6V3W6 876 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 IqcgQ80W32 419 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Eif3bQ8JZQ9 803 aaKnown RBP15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ppil4Q9CXG3 492 aaKnown RBP15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Zbtb43Q9DAI4 467 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Lmtk3Q5XJV6 1424 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Col3a1P08121 1464 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ubr2Q6WKZ8 1755 aa15.42■□□□□ 0.06
Nup88-201ENSMUST00000035283 Naaladl2A0A0N4SUJ3 795 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Luc7l2Q7TNC4 392 aaKnown RBP15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 RgmbQ7TQ33 436 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Necab1Q8BG18 352 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Zkscan8Q8BSL0 588 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ints5Q8CHT3 1018 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Slain2Q8CI08 581 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Mical1Q8VDP3 1048 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 BccipQ9CWI3 316 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Rimbp3Q3V0F0 1606 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Myo3bQ1EG27 1305 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Prr29B1ARI9 187 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ftl2P49945 183 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Cep63Q3UPP8 700 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ankk1Q8BZ25 745 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Kcnj14Q8JZN3 434 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Atp1a4Q9WV27 1032 aa15.41■□□□□ 0.06
Nup88-201ENSMUST00000035283 Pcdhb9E9Q5G2 828 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Card10P58660 1021 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Eif5P59325 429 aaKnown RBP15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ccdc34Q3UI66 367 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Hspa4Q61316 841 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Igsf3Q6ZQA6 1194 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Tcp11l1Q8BTG3 509 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Tc2nQ91XT6 489 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Pcdhb22Q91XZ8 794 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Polr2dQ9D7M8 142 aaKnown RBP15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Cbx6Q9DBY5 414 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Ehd4Q9EQP2 541 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Tnks1bp1P58871 1720 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Map7d2A2AG50 781 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Gpr182P43142 395 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Mctp2Q5RJH2 878 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Usp49Q6P9L4 685 aa15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Smc1aQ9CU62 1233 aaKnown RBP15.4■□□□□ 0.06
Nup88-201ENSMUST00000035283 Rsrc2A2RTL5 376 aaKnown RBP15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Zbtb38Q3LR78 1197 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ttll12Q3UDE2 639 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Myo1aO88329 1043 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Gabpb2P81069 414 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Slc7a1Q09143 622 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Arglu1Q3UL36 271 aaKnown RBP15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 MlecQ6ZQI3 291 aaKnown RBP15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Clic6Q8BHB9 596 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Alx1Q8C8B0 326 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Evc2Q8K1G2 1220 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 GptQ8QZR5 496 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Baiap2l1Q9DBJ3 514 aa15.39■□□□□ 0.05
Nup88-201ENSMUST00000035283 Dnajc2P54103 621 aaKnown RBP15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Psmb7P70195 277 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Washc4Q3UMB9 1173 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Cdkl5Q3UTQ8 938 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Lamb3Q61087 1168 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Lmod1Q8BVA4 595 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ccdc12Q8R344 166 aaKnown RBP15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Sirt2Q8VDQ8 389 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Gm3409A0A0G2JE67 319 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Pex1Q5BL07 1284 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ift122Q6NWV3 1182 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Atp1a2Q6PIE5 1020 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Glis3Q6XP49 780 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Adck5Q80V03 582 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Slitrk3Q810B9 980 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Iqcb1Q8BP00 598 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 9230110C19RikQ8CC70 267 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Ccdc150Q8CDI7 1110 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Eaf2Q91ZD6 262 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Cep89Q9CZX2 791 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Etnk1Q9D4V0 363 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 Eif2ak3Q9Z2B5 1114 aa15.38■□□□□ 0.05
Nup88-201ENSMUST00000035283 FocadA2AKG8 1798 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms