RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Nrbp1Q99J45 535 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Dusp10Q9ESS0 483 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Adarb2Q9JI20 745 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Plekho1Q9JIY0 408 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Irx4Q9QY61 515 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tulp1Q9Z273 543 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cdkn1cP49919 348 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Gja5Q01231 358 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Nlrp9aQ66X03 949 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Edrf1Q6GQV7 1239 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Dnaaf2Q8BPI1 814 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tpcn2Q8BWC0 731 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Fsd2Q8BZ52 692 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Q8C6G1 249 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Alx1Q8C8B0 326 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 SdsQ8VBT2 327 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cnot6lQ8VEG6 555 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Pcdhb22Q91XZ8 794 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 CpvlQ9D3S9 478 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Odf2lQ9D478 642 aa13.18□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ube4aE9Q735 1028 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Oas2E9Q9A9 742 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Prl3d1P18121 224 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 MsnP26041 577 aaKnown RBP13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ano6Q6P9J9 911 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ano10Q8BH79 659 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tmem143Q8VD26 458 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Yeats4Q9CR11 227 aaKnown RBP13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 FAM186AQ9D9R9 1790 aa13.17□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ccng2O08918 344 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Rps8P62242 208 aaKnown RBP13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Hnrnpul1Q8VDM6 859 aaKnown RBP13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Stk38Q91VJ4 465 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Tlcd1Q99JT6 247 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ifi35Q9D8C4 286 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Setdb1O88974 1307 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Atp2b1G5E829 1220 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Atp6v0a2P15920 856 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Znf496Q5SXI5 585 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Dhx40Q6PE54 779 aaKnown RBP13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Rbm42Q91V81 474 aaKnown RBP13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Mtfr1lQ9CWE0 289 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Clic4Q9QYB1 253 aa13.16□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Gm20425E9Q035 978 aaKnown RBP13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Pcdhb9E9Q5G2 828 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Cyp2d9P11714 504 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Sept1P42209 366 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 SrprbP47758 269 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Plbd2Q3TCN2 594 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Gm28047Q3US59 414 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Ints4Q8CIM8 964 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Kcnk13Q8R1P5 405 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 McamQ8R2Y2 648 aaKnown RBP13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Fbxo3Q9DC63 480 aa13.15□□□□□ -0.3
Ddx56-201ENSMUST00000004507 Map3k15A2AQW0 1331 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Myo3bQ1EG27 1305 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Cyp3a59D3Z2W7 503 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Pde8bE9Q4S1 865 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Trim30aP15533 496 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Sptlc2P97363 560 aaKnown RBP13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 IntuQ059U7 942 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Sptlc3Q8BG54 563 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Q8BZJ8 459 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Ccz1Q8C1Y8 480 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Golph3lQ8R088 285 aaKnown RBP13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Dydc2Q9D3X8 139 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Mei1Q9D4I2 1268 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Scn11aQ9R053 1765 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Znf609Q8BZ47 1413 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 CpdO89001 1377 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Nup98Q6PFD9 1816 aaKnown RBP13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Pramel3A2AHA7 463 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Gm7903A2AWL1 463 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 AV320801A2AWL3 467 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Gm15023L7MUB4 467 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Celf1P28659 486 aaKnown RBP13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Psd3Q2PFD7 1037 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Plekhf1Q3TB82 279 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Fhdc1Q3ULZ2 1149 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Slu7Q8BHJ9 585 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 HlfQ8BW74 295 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Ppm1fQ8CGA0 452 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Serpina10Q8R121 448 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Nop2Q922K7 793 aaKnown RBP13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Zbtb43Q9DAI4 467 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Frmpd3A0A140LIW3 1774 aa13.14□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Rgs12Q8CGE9 1381 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Gm43638A0A0J9YU36 694 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Ildr2B5TVM2 661 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Irf5P56477 497 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Dok7Q18PE0 504 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Kcnq3Q8K3F6 873 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Dnaaf4Q8R368 420 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Med23Q80YQ2 1367 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Mast3Q3U214 1321 aa13.13□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Lipo1J3QME6 396 aa13.12□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Metap2O08663 478 aaKnown RBP13.12□□□□□ -0.31
Ddx56-201ENSMUST00000004507 NfixP70257 488 aa13.12□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Cdkl5Q3UTQ8 938 aa13.12□□□□□ -0.31
Ddx56-201ENSMUST00000004507 Zkscan4Q5SZT6 480 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms