RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Hdac6Q9Z2V5 1149 aa21.62■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 LtkP08923 888 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Myl10Q62082 202 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Nme8Q715T0 586 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 VmacQ8BP01 174 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ddx41Q91VN6 622 aaKnown RBP21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Fbxo3Q9DC63 480 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Dapk3O54784 448 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Abtb2Q7TQI7 1024 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Dcaf5Q80T85 946 aa21.61■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Myh6Q02566 1938 aaKnown RBP21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 CoblQ5NBX1 1337 aaKnown RBP21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ccdc121E9Q6D3 323 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Trim34bJ3QNR8 485 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Fkbp1aP26883 108 aaKnown RBP21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 CebpaP53566 359 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ckap2Q3V1H1 664 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Prl2c1Q5SVL9 228 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Prpf4bQ61136 1007 aaKnown RBP21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Haus7Q8BKT8 364 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Lmod1Q8BVA4 595 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 CerkQ8K4Q7 531 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ces1dQ8VCT4 565 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ccdc174Q3U155 467 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Brinp3Q499E0 766 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Cyp7a1Q64505 503 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Slc44a1Q6X893 653 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Mei4Q8BRM6 389 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Tcp11l1Q8BTG3 509 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Zbtb1Q91VL9 713 aa21.6■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Myh3P13541 1940 aa21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Atp8b5A3FIN4 1183 aa21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ythdc1E9Q5K9 736 aaKnown RBP21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 L1td1Q587J6 782 aaKnown RBP21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Abcf1Q6P542 837 aaKnown RBP21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Mroh6V9GX81 722 aa21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ddx27Q921N6 760 aaKnown RBP21.59■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Ltbp4Q8K4G1 1666 aa21.58■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Kndc1Q0KK55 1742 aa21.58■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Cep120Q7TSG1 988 aa21.58■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Frat2Q8K025 231 aa21.58■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Zkscan5Q9Z1D8 819 aa21.58■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Atp12aQ9Z1W8 1035 aa21.58■■□□□ 1.05
Shkbp1-201ENSMUST00000003857 Kcnh4A2A5F7 1018 aa21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Epb41l2O70318 988 aaKnown RBP21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 NapbP28663 298 aa21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Samsn1P57725 372 aa21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Zfp91Q62511 572 aa21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 IcoslgQ9JHJ8 322 aa21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Kcnh3Q9WVJ0 1095 aa21.58■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Frmd7A2AD83 703 aa21.57■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Gm4340L7N2C4 268 aa21.57■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 PsdQ5DTT2 1024 aa21.57■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 9230110C19RikQ8CC70 267 aa21.57■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Lrrc59Q922Q8 307 aaKnown RBP21.57■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Zbtb21E9Q444 1094 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Plekho1Q9JIY0 408 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 GmnnO88513 206 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Hps6Q8BLY7 805 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Ccdc150Q8CDI7 1110 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Evc2Q8K1G2 1220 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Mtmr6Q8VE11 617 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Magi2Q9WVQ1 1275 aa21.56■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Pde4dQ01063 747 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Paf1Q8K2T8 535 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Rbm43Q99J64 343 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Trim11Q99PQ2 467 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Mrps25Q9D125 171 aaKnown RBP21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Myo3bQ1EG27 1305 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Lmod3E9QA62 571 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Ess2O70279 479 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Cnnm2Q3TWN3 875 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Washc4Q3UMB9 1173 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Fam170aQ66LM6 333 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 4930548H24RikQ9D496 437 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Suclg2Q9Z2I8 433 aa21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 AfdnQ9QZQ1 1820 aaKnown RBP21.55■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 4931408C20RikE9PWP9 1381 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Pde4bB1AWC9 736 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Ampd3O08739 766 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Myo1bP46735 1107 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Slc7a1Q09143 622 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Agtpbp1Q641K1 1218 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Cdc27A2A6Q5 825 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Speer4dL7N216 212 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Paxbp1P58501 919 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Wasf1Q8R5H6 559 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Tubb4aQ9D6F9 444 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Cnpy3Q9DAU1 276 aa21.54■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Znf653Q6YND2 615 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Tgs1Q923W1 853 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Dnajc25A2ALW5 357 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Grin1P35438 938 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Pip4k2bQ80XI4 416 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Kcnj14Q8JZN3 434 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Rtn1Q8K0T0 780 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Scn11aQ9R053 1765 aa21.53■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Luc7l2Q7TNC4 392 aaKnown RBP21.52■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 Stag1Q9D3E6 1258 aa21.52■■□□□ 1.04
Shkbp1-201ENSMUST00000003857 FliiQ9JJ28 1271 aa21.52■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 1514.2 ms