RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 SCN8AQ9UQD0 1980 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 C17orf51A8MQB3 221 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 TNFP01375 233 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 SPINK8P0C7L1 97 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 TRGC1P0CF51 173 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 ZNF19P17023 458 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 IL17AQ16552 155 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 TMEM155Q4W5P6 130 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 PABPC1L2AQ5JQF8 200 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 CLLU1Q5K131 121 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 DPPA3Q6W0C5 159 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 SOSTDC1Q6X4U4 206 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 MCEEQ96PE7 176 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 UPK3BQ9BT76 320 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 NAA60Q9H7X0 242 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 RPRMQ9NS64 109 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 MDFICQ9P1T7 246 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 OR5V1Q9UGF6 321 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 U3KQK5 164 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 CROCCQ5TZA2 2017 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 KIAA1551Q9HCM1 1747 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 GTF3C1Q12789 2109 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 NUP98P52948 1817 aa2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 COL3A1P02461 1466 aaPredicted RBP2.33□□□□□ -2.04
CHRNA4-220ENST00000637628 SCN1AP35498 2009 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 MED1Q15648 1581 aaPredicted RBP2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 BCORL1Q5H9F3 1711 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 TRAV12-2A0A075B6T6 113 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 IGKV6D-41A0A0C4DH26 115 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 CYSRT1A8MQ03 144 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 C3orf84H3BNL1 204 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 H3BT86 120 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 SYNGR2O43760 224 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 CREBL2O60519 120 aaPredicted RBP2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 TCL1BO95988 128 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 IFITM1P13164 125 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 TPT1P13693 172 aaKnown RBP2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 MIAQ16674 131 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 KHDC3LQ587J8 217 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 IMMP1LQ96LU5 166 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 SEC11CQ9BY50 192 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 LINC00574Q9H8X3 128 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 FKBP11Q9NYL4 201 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 NSD3Q9BZ95 1437 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 TOPBP1Q92547 1522 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 DLC1Q96QB1 1528 aa2.32□□□□□ -2.04
CHRNA4-220ENST00000637628 IGKV3D-20A0A0C4DH25 116 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 MDFIC2A0A1B0GVS7 189 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 FAM168BA1KXE4 195 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 GEMIN2O14893 280 aaKnown RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 NPYP01303 97 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 PMP2P02689 132 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 ZNF705BP0CI00 300 aaPredicted RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 CCL5P13501 91 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 RPS10P46783 165 aaKnown RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 PCBD1P61457 104 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 IGLV3-21P80748 117 aaPredicted RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 ZNF90Q03938 601 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 KLRD1Q13241 179 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 CDK5R1Q15078 307 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 UBE2SQ16763 222 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 Q56UQ5 140 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 C9orf153Q5TBE3 101 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 ZC2HC1BQ5TFG8 222 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 LINC01545Q5VT33 79 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 LYZL2Q7Z4W2 148 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 LINC00471Q8N535 108 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 TTC9CQ8N5M4 171 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 FAM216BQ8N7L0 139 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 PLPP5Q8NEB5 264 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 CLDND2Q8NHS1 167 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 SMCR5Q8TEV8 140 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 PKMYT1Q99640 499 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 AGPAT4-IT1Q9H0P7 198 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 SAR1AQ9NR31 198 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 LSM2Q9Y333 95 aaKnown RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 NOP16Q9Y3C1 178 aaKnown RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 DNAJC15Q9Y5T4 150 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 CHCHD2Q9Y6H1 151 aaPredicted RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 KTN1Q86UP2 1357 aaKnown RBP2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 RGS12O14924 1447 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 KIAA1107Q9UPP5 1409 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 A2ML1A8K2U0 1454 aa2.31□□□□□ -2.04
CHRNA4-220ENST00000637628 SCN9AQ15858 1988 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 HEATR5AQ86XA9 2040 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 PLXNB1O43157 2135 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 ZNF407Q9C0G0 2248 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 TRBV20-1A0A075B6N2 111 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 A0A0D9SG52 128 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 APOC4-APOC2K7ER74 178 aa2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
CHRNA4-220ENST00000637628 APOC2P02655 101 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms