RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IGKV1D-39P04432 117 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 H3BMM0 161 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 UBE2WQ96B02 151 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 TRAV8-1A0A0A6YYK1 113 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 A6NNC1 897 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 LEPROTO15243 131 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 LYZL1Q6UWQ5 148 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 COL4A5P29400 1685 aa14.65□□□□□ -0.06
CACNA1A-227ENST00000636549 RS1O15537 224 aa14.65□□□□□ -0.07
CACNA1A-227ENST00000636549 SH2D1AO60880 128 aa14.65□□□□□ -0.07
CACNA1A-227ENST00000636549 PMVKQ15126 192 aa14.65□□□□□ -0.07
CACNA1A-227ENST00000636549 TAL2Q16559 108 aa14.65□□□□□ -0.07
CACNA1A-227ENST00000636549 PVRIGQ6DKI7 326 aa14.65□□□□□ -0.07
CACNA1A-227ENST00000636549 FAM90A1Q86YD7 464 aa14.65□□□□□ -0.07
CACNA1A-227ENST00000636549 KIF13BQ9NQT8 1826 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 UBR3Q6ZT12 1888 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 IGHV4-28A0A0C4DH34 117 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 AZU1P20160 251 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 RTBDNQ9BSG5 229 aaPredicted RBP14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 RHPN1-AS1Q9BWJ2 59 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 PQLC2LA1A4F0 135 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 IGHV1-8P0DP01 117 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 CACNG8Q8WXS5 425 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 J3QW42 95 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 ZNF138P52744 262 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 GREM1O60565 184 aa14.64□□□□□ -0.07
CACNA1A-227ENST00000636549 UCP3P55916 312 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 PRIMA1Q86XR5 153 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 TAF1LQ8IZX4 1826 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 SMIM10L1P0DMW3 83 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 SMIM10Q96HG1 83 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 CA7P43166 264 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 ZNF497Q6ZNH5 498 aa14.63□□□□□ -0.07
CACNA1A-227ENST00000636549 LGALS1P09382 135 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 PCP4P48539 62 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 ASPHD1Q5U4P2 390 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 TMEM14DPA8MWL7 114 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 GHRHP01286 108 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 LINC01619G3V211 115 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 WBP1Q96G27 269 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 RPL23P62829 140 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 TMEM178BH3BS89 294 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 C1orf100Q5SVJ3 147 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 LCN12Q6JVE5 192 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 RASL10AQ92737 203 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 PRDM13Q9H4Q3 707 aa14.62□□□□□ -0.07
CACNA1A-227ENST00000636549 TMEM30BQ3MIR4 351 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 MAP1BP46821 2468 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 TUBGCP6Q96RT7 1819 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 CD5LO43866 347 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 COL11A2P13942 1736 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 MLANAQ16655 118 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 CR1LQ2VPA4 569 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 NEGR1Q7Z3B1 354 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 NRN1Q9NPD7 142 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 KLF12Q9Y4X4 402 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 RTTNQ86VV8 2226 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 RFNGQ9Y644 331 aa14.61□□□□□ -0.07
CACNA1A-227ENST00000636549 PATJQ8NI35 1801 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 NMBP08949 121 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 LINC01590Q5TEZ4 76 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 RASL11AQ6T310 242 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 COL18A1P39060 1754 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 ANGP03950 147 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 SRSF3P84103 164 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 C8orf49Q96NF6 230 aa14.6□□□□□ -0.07
CACNA1A-227ENST00000636549 hDV102S1A0JD36 115 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 LRCOL1A6NCL2 159 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 EFNB3Q15768 340 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 YPEL1O60688 119 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 CD177Q8N6Q3 437 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 YPEL2Q96QA6 119 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 TP53BP1Q12888 1972 aaPredicted RBP14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 DEFB136Q30KP8 78 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 TRAV26-2A0A0B4J265 109 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 PRSS29PA6NIE9 313 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 C2orf82Q6UX34 121 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 C20orf204Q6ZNR8 217 aa14.59□□□□□ -0.07
CACNA1A-227ENST00000636549 VWC2Q2TAL6 325 aa14.58□□□□□ -0.07
CACNA1A-227ENST00000636549 KLF5Q13887 457 aaPredicted RBP14.58□□□□□ -0.07
CACNA1A-227ENST00000636549 NABP1Q96AH0 204 aa14.58□□□□□ -0.08
CACNA1A-227ENST00000636549 PLXNA1Q9UIW2 1896 aa14.58□□□□□ -0.08
CACNA1A-227ENST00000636549 LY75O60449 1722 aa14.58□□□□□ -0.08
CACNA1A-227ENST00000636549 BUB1B-PAK6H3BSN5 160 aa14.58□□□□□ -0.08
CACNA1A-227ENST00000636549 OCC1Q8TAD7 63 aa14.58□□□□□ -0.08
CACNA1A-227ENST00000636549 AHCTF1Q8WYP5 2266 aa14.58□□□□□ -0.08
CACNA1A-227ENST00000636549 G3V318 75 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 IFITM3Q01628 133 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 TRBV7-1A0A0A6YYK4 115 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 CSRP1P21291 193 aaKnown RBP14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 RPRMLQ8N4K4 120 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 BRWD3Q6RI45 1802 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 ZNF98A6NK75 572 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 A8MWV9 139 aa14.57□□□□□ -0.08
CACNA1A-227ENST00000636549 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 SCRT2Q9NQ03 307 aa14.56□□□□□ -0.08
CACNA1A-227ENST00000636549 MSMBP08118 114 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms