RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 SPOCK3Q9BQ16 436 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 Q9H3A6 140 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 OTORQ9NRC9 128 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 TRBV9A0A0B4J1U6 114 aa12.36□□□□□ -0.43
NR1H3-235ENST00000616973 CENPVL3A0A0U1RRI6 287 aa12.36□□□□□ -0.43
NR1H3-235ENST00000616973 ZNF586Q9NXT0 402 aa12.36□□□□□ -0.43
NR1H3-235ENST00000616973 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 SMIM27A0A1W2PRY6 76 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
NR1H3-235ENST00000616973 FCGR2BP31994 310 aaPredicted RBP12.35□□□□□ -0.43
NR1H3-235ENST00000616973 UBE2G1P62253 170 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 GNG5P63218 68 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 COX19Q49B96 90 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 TXN2Q99757 166 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 TCRAP04437 139 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 BPIFA4PQ86YQ2 179 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 OR8I2Q8N0Y5 310 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 OR10D4PQ8NGN7 298 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 FAM110DQ8TAY7 271 aaPredicted RBP12.35□□□□□ -0.43
NR1H3-235ENST00000616973 FMC1Q96HJ9 113 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 CHRDL1Q9BU40 450 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 C7orf69Q9H7B7 122 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 NIT2Q9NQR4 276 aa12.35□□□□□ -0.43
NR1H3-235ENST00000616973 NDUFB8O95169 186 aa12.34□□□□□ -0.43
NR1H3-235ENST00000616973 IL4P05112 153 aa12.34□□□□□ -0.43
NR1H3-235ENST00000616973 SNRPCP09234 159 aaKnown RBP12.34□□□□□ -0.43
NR1H3-235ENST00000616973 VN1R17PQ8TDU5 208 aa12.34□□□□□ -0.43
NR1H3-235ENST00000616973 MBD6Q96DN6 1003 aa12.34□□□□□ -0.43
NR1H3-235ENST00000616973 GPR82Q96P67 336 aa12.34□□□□□ -0.43
NR1H3-235ENST00000616973 ABCA1O95477 2261 aa12.34□□□□□ -0.43
NR1H3-235ENST00000616973 SCGB2A1O75556 95 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 FABP4P15090 132 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 PYY3Q5JQD4 70 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 LYPD1Q8N2G4 141 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 NHLRC2Q8NBF2 726 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 HSPB9Q9BQS6 159 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 GNB1LQ9BYB4 327 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 IGHV4-61A0A0C4DH41 118 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 ZNF705GA8MUZ8 300 aaPredicted RBP12.33□□□□□ -0.44
NR1H3-235ENST00000616973 MRPS12O15235 138 aaKnown RBP12.33□□□□□ -0.44
NR1H3-235ENST00000616973 IGLC2P0DOY2 106 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 ADMP35318 185 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 Q56UQ5 140 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 DNLZQ5SXM8 178 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 OR4F17Q8NGA8 305 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 MLST8Q9BVC4 326 aa12.33□□□□□ -0.44
NR1H3-235ENST00000616973 TRBV19A0A075B6N1 114 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 IGHV1-69DA0A0B4J2H0 117 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 GATCO43716 136 aaKnown RBP12.32□□□□□ -0.44
NR1H3-235ENST00000616973 OR2J3O76001 311 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 LTAP01374 205 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 IGHV1-69P01742 117 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 MT-ND6P03923 174 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 CBLN1P23435 193 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 WDR73Q6P4I2 378 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 S4R3C0 116 aa12.32□□□□□ -0.44
NR1H3-235ENST00000616973 TRBV6-1A0A0K0K1D8 114 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 IZUMO1RA6ND01 250 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 AMBPP02760 352 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 ATP5J2P56134 94 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 USF2Q15853 346 aaPredicted RBP12.31□□□□□ -0.44
NR1H3-235ENST00000616973 NUDT10Q8NFP7 164 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 NUDT11Q96G61 164 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 GRAMD2BQ96HH9 432 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 PACRGQ96M98 296 aaPredicted RBP12.31□□□□□ -0.44
NR1H3-235ENST00000616973 MRPL18Q9H0U6 180 aaKnown RBP12.31□□□□□ -0.44
NR1H3-235ENST00000616973 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 ABCA2Q9BZC7 2435 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 H3BTX0 84 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 UNQ5815/PRO19632Q6UWF5 114 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 ZNF492Q9P255 531 aa12.31□□□□□ -0.44
NR1H3-235ENST00000616973 ATP6V0E1O15342 81 aa12.3□□□□□ -0.44
NR1H3-235ENST00000616973 CTSGP08311 255 aa12.3□□□□□ -0.44
NR1H3-235ENST00000616973 RNF224P0DH78 156 aa12.3□□□□□ -0.44
NR1H3-235ENST00000616973 IER3P46695 156 aa12.3□□□□□ -0.44
NR1H3-235ENST00000616973 C5orf56Q8N8D9 126 aa12.3□□□□□ -0.44
NR1H3-235ENST00000616973 RPH3ALQ9UNE2 315 aa12.3□□□□□ -0.44
NR1H3-235ENST00000616973 SNURFLB1AK76 121 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 PDE6HQ13956 83 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 RASL11AQ6T310 242 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 SIGLEC15Q6ZMC9 328 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 ZNF414Q96IQ9 312 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 MEGF9Q9H1U4 602 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 MED13LQ71F56 2210 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 USP24Q9UPU5 2620 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 AMY1AP04745 511 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 GBGT1Q8N5D6 347 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 ZNF502Q8TBZ5 544 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 WIPF2Q8TF74 440 aaPredicted RBP12.29□□□□□ -0.44
NR1H3-235ENST00000616973 GSN-AS1Q9NRJ2 163 aa12.29□□□□□ -0.44
NR1H3-235ENST00000616973 TACC2O95359 2948 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms