RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 LINC00862A6NCI5 91 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 IFNA1P01562 189 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 CTSGP08311 255 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 PPT1P50897 306 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 KHDC1LQ5JSQ8 128 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 CDPF1Q6NVV7 123 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 RPP25LQ8N5L8 163 aaKnown RBP11.35□□□□□ -0.59
CAPN12-202ENST00000593700 OR5AU1Q8NGC0 362 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 MYOZ3Q8TDC0 251 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 MBD3L1Q8WWY6 194 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 RAB24Q969Q5 203 aa11.35□□□□□ -0.59
CAPN12-202ENST00000593700 TECRQ9NZ01 308 aaKnown RBP11.35□□□□□ -0.59
CAPN12-202ENST00000593700 GGCTO75223 188 aaKnown RBP11.34□□□□□ -0.59
CAPN12-202ENST00000593700 CXorf1O96002 111 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
CAPN12-202ENST00000593700 GCSAMLQ5JQS6 135 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 ZNF491Q8N8L2 437 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 SPATA3Q8NHX4 192 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 LYPD6BQ8NI32 183 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 WFDC12Q8WWY7 111 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 PEF1Q9UBV8 284 aaKnown RBP11.34□□□□□ -0.59
CAPN12-202ENST00000593700 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
CAPN12-202ENST00000593700 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
CAPN12-202ENST00000593700 WI2-2373I1.2A0A1W2PRP0 233 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 CLPSL1A2RUU4 121 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 NDUFA4O00483 81 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 ADMP35318 185 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 PSMB3P49720 205 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 LINC00305Q7Z4B0 112 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.33□□□□□ -0.6
CAPN12-202ENST00000593700 LINC01006Q8NI28 216 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
CAPN12-202ENST00000593700 CHRDL1Q9BU40 450 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 RNF114Q9Y508 228 aa11.33□□□□□ -0.6
CAPN12-202ENST00000593700 PPP5D1E7EU14 171 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 OR7C2O60412 319 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 STAG3L2P0CL84 134 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 STAG3L3P0CL85 134 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 C8orf88P0DMB2 117 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 TAGLN2P37802 199 aaKnown RBP11.32□□□□□ -0.6
CAPN12-202ENST00000593700 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 C10orf99Q6UWK7 81 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 TMEM37Q8WXS4 190 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 MARC2Q969Z3 335 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 MANBALQ9NQG1 85 aa11.32□□□□□ -0.6
CAPN12-202ENST00000593700 A0A1B0GV50 99 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 ARL14EPLP0DKL9 152 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
CAPN12-202ENST00000593700 FGF8P55075 233 aaPredicted RBP11.31□□□□□ -0.6
CAPN12-202ENST00000593700 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 C4orf3Q8WVX3 66 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 METTL26Q96S19 204 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 SEPSECSQ9HD40 501 aaKnown RBP11.31□□□□□ -0.6
CAPN12-202ENST00000593700 TMEM167BQ9NRX6 74 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 STAB1Q9NY15 2570 aa11.31□□□□□ -0.6
CAPN12-202ENST00000593700 H3BRN7 92 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
CAPN12-202ENST00000593700 ZP3P21754 424 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 BMI1P35226 326 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 UQCC3Q6UW78 93 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 C12orf54Q6X4T0 127 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 MIR17HGQ75NE6 70 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 OR5B12Q96R08 314 aa11.3□□□□□ -0.6
CAPN12-202ENST00000593700 SLC25A39Q9BZJ4 359 aaPredicted RBP11.3□□□□□ -0.6
CAPN12-202ENST00000593700 MRPL27Q9P0M9 148 aaKnown RBP11.3□□□□□ -0.6
CAPN12-202ENST00000593700 CUBNO60494 3623 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
CAPN12-202ENST00000593700 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
CAPN12-202ENST00000593700 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
CAPN12-202ENST00000593700 USF2Q15853 346 aaPredicted RBP11.29□□□□□ -0.6
CAPN12-202ENST00000593700 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 TOMM20LQ6UXN7 152 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 PATE2Q6UY27 113 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
CAPN12-202ENST00000593700 FAM210AQ96ND0 272 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 SHANK2-AS3Q9BTD1 123 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 C20orf24Q9BUV8 137 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
CAPN12-202ENST00000593700 ARL2-SNX15V9GYD0 113 aa11.29□□□□□ -0.6
CAPN12-202ENST00000593700 IGHV3-35A0A0C4DH35 117 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 TRBV12-3P01733 135 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 GCHFRP30047 84 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 PMS2P11Q13670 270 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
CAPN12-202ENST00000593700 PEA15Q15121 130 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 TM4SF20Q53R12 229 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 BPIFA4PQ86YQ2 179 aa11.28□□□□□ -0.6
CAPN12-202ENST00000593700 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms