RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 H3BUT2 72 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 FCGR3BO75015 233 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 PROP1O75360 226 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 NXPH3O95157 252 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 CNIH1O95406 144 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 SAA2P0DJI9 122 aaPredicted RBP7.81□□□□□ -1.16
LINC01539-201ENST00000587904 HIST1H1EP10412 219 aaKnown RBP7.81□□□□□ -1.16
LINC01539-201ENST00000587904 CDSNQ15517 529 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 SPATA31B1PQ5VZV4 182 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 EBLN2Q6P2I7 272 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 TTC9CQ8N5M4 171 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 ZNF525Q8N782 197 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 TMEM70Q9BUB7 260 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 KCNIP2Q9NS61 270 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 SIGLEC8Q9NYZ4 499 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 ZNF257Q9Y2Q1 563 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 UFC1Q9Y3C8 167 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 ADGRG4Q8IZF6 3080 aa7.81□□□□□ -1.16
LINC01539-201ENST00000587904 HLA-DQA1P01909 254 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 FABP2P12104 132 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 IGFBP2P18065 325 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 NTF3P20783 257 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 NPPCP23582 126 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 GATA3P23771 443 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 RPEL1Q2QD12 228 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 RPL39P5Q59GN2 51 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 FAM162BQ5T6X4 162 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 SPANXB1Q9NS25 103 aaPredicted RBP7.8□□□□□ -1.16
LINC01539-201ENST00000587904 LY96Q9Y6Y9 160 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 USF3Q68DE3 2245 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 ARFGEF3Q5TH69 2177 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 C11orf94C9JXX5 98 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 IGHG4P01861 327 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 IAPPP10997 89 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 PDLIM3Q53GG5 364 aaPredicted RBP7.8□□□□□ -1.16
LINC01539-201ENST00000587904 TMEM200BQ69YZ2 307 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 ACSM6Q6P461 480 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 TMEM14EPQ6UXP3 125 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 TMEM136Q6ZRR5 245 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 SMIM20Q8N5G0 67 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 ST6GALNAC6Q969X2 333 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 QTRT1Q9BXR0 403 aaKnown RBP7.8□□□□□ -1.16
LINC01539-201ENST00000587904 TMEM191AQ9H0A3 160 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 NAT8BQ9UHF3 227 aa7.8□□□□□ -1.16
LINC01539-201ENST00000587904 FBLL1A6NHQ2 334 aaKnown RBP7.79□□□□□ -1.16
LINC01539-201ENST00000587904 F8W1H4 67 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 H3BP45 60 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 PAGE4O60829 102 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 ID1P41134 155 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 GNB1P62873 340 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 TMEM155Q4W5P6 130 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 ADAMTSL5Q6ZMM2 481 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 FAM19A2Q8N3H0 131 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 RPP25LQ8N5L8 163 aaKnown RBP7.79□□□□□ -1.16
LINC01539-201ENST00000587904 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 H1FXQ92522 213 aaKnown RBP7.79□□□□□ -1.16
LINC01539-201ENST00000587904 LEAP2Q969E1 77 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 CTSZQ9UBR2 303 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 KALRNO60229 2985 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 SMG1Q96Q15 3661 aaKnown RBP7.79□□□□□ -1.16
LINC01539-201ENST00000587904 M0R2Z0 102 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 BMPR1BO00238 502 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 ISLRO14498 428 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 WIPF1O43516 503 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 HSBP1O75506 76 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 OR9G9P0C7N8 305 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 SRIP30626 198 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 KLF5Q13887 457 aaPredicted RBP7.79□□□□□ -1.16
LINC01539-201ENST00000587904 RTL8BQ17RB0 113 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 C5orf47Q569G3 176 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 C11orf71Q6IPW1 123 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 LYPD2Q6UXB3 125 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 ZNF833PQ6ZTB9 187 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 BPIFA4PQ86YQ2 179 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 OR4A16Q8NH70 328 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 NEU4Q8WWR8 484 aaPredicted RBP7.79□□□□□ -1.16
LINC01539-201ENST00000587904 C19orf24Q9BVV8 132 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 SERTAD4Q9NUC0 356 aa7.79□□□□□ -1.16
LINC01539-201ENST00000587904 HCFC1P51610 2035 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 ROS1P08922 2347 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 A0A087X0K7 114 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 VWC2LB2RUY7 222 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 FCN3O75636 299 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 IGHV3-7P01780 117 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 RBP4P02753 201 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 AMY1AP04745 511 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 COX8AP10176 69 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 DLX6P56179 175 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 CX3CL1P78423 397 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 SPANXN5Q5MJ07 72 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 DTX2Q86UW9 622 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 ITLN2Q8WWU7 325 aaPredicted RBP7.78□□□□□ -1.16
LINC01539-201ENST00000587904 ZC2HC1AQ96GY0 325 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 GGTLC1Q9BX51 225 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 PKDREJQ9NTG1 2253 aa7.78□□□□□ -1.16
LINC01539-201ENST00000587904 CCL3L1P16619 93 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms