RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 RIMBP3CA6NJZ7 1639 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 RIMBP3BA6NNM3 1639 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 RIMBP3Q9UFD9 1639 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 TRAV7A0A075B6U4 112 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 TMEM235A6NFC5 223 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 K7ERJ3 54 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 SCTP09683 121 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 UBBP0CG47 229 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 COX4I1P13073 169 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 SRP14P37108 136 aaKnown RBP1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 DYNLT3P51808 116 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 DNAJB13P59910 316 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 UBE2BP63146 152 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 EIF5AP63241 154 aaKnown RBP1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 DEFB103AP81534 67 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 OR4E2Q8NGC2 313 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 OR5A1Q8NGJ0 315 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 OR2T10Q8NGZ9 312 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 SCGB3A1Q96QR1 104 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 CGREF1Q99674 301 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 PLXNA3P51805 1871 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 MED23Q9ULK4 1368 aa1.71□□□□□ -2.14
SHCBP1-206ENST00000567698 CCDC171Q6TFL3 1326 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 TRGV5A0A0B4J1U4 118 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 LOC107984640A0A0U1RRK4 108 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 MEIS3P1A6NDR6 274 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 OR2H2O95918 312 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 MSMBP08118 114 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 CRYGAP11844 174 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 KDELR1P24390 212 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 TMBIM6P55061 237 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 BCL2L15Q5TBC7 163 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 FAM27BQ5VT28 67 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 C22orf39Q6P5X5 142 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 SOSTDC1Q6X4U4 206 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 TRAPPC6BQ86SZ2 158 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 OR8I2Q8N0Y5 310 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 C10orf126Q8N4M7 172 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 PPTC7Q8NI37 304 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 HIST1H2BLQ99880 126 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 CBLN4Q9NTU7 201 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 TXNL4BQ9NX01 149 aaKnown RBP1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 SPANXCQ9NY87 97 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 U3KQ87 197 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 ARHGAP32A7KAX9 2087 aa1.7□□□□□ -2.14
SHCBP1-206ENST00000567698 CCDC88CQ9P219 2028 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 TRAPPC8Q9Y2L5 1435 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 A0A1B0GVG6 124 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 C5orf58C9J3I9 102 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 GGCTO75223 188 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 LYZL6O75951 148 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 NAPSAO96009 420 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 MT-ND4LP03901 98 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 DBIP07108 87 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 CMPK1P30085 196 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 EIF2B2P49770 351 aaKnown RBP1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 VMA21Q3ZAQ7 101 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 RPL13AP3Q6NVV1 102 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 PATE2Q6UY27 113 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 PDZD9Q8IXQ8 264 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 VPS25Q9BRG1 176 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 TRPM1Q7Z4N2 1603 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 ERCC6Q03468 1493 aa1.69□□□□□ -2.14
SHCBP1-206ENST00000567698 SCN8AQ9UQD0 1980 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 FRMPD1Q5SYB0 1578 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 PIK3C2AO00443 1686 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 STRCQ7RTU9 1775 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 MEIKINA0A087WXM9 373 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 A0A096LPI6 279 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TRAV5A0A0B4J249 113 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 IGHV1-58A0A0C4DH39 117 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TRBV7-6A0A0J9YX20 115 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 A0A0J9YX75 114 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 CCDC160A6NGH7 325 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 ODF3BA8MYP8 253 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TP53I11O14683 189 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 SLC22A1O15245 554 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 NDUFB3O43676 98 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 CREBL2O60519 120 aaPredicted RBP1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 CST7O76096 145 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 SDC2P34741 201 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 DYNLT1P63172 113 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 HBBP68871 147 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 GLYATL3Q5SZD4 288 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TMEM244Q5VVB8 128 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TMEM14EPQ6UXP3 125 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 LRRC28Q86X40 367 aaPredicted RBP1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TCTE3Q8IZS6 198 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TEX29Q8N6K0 151 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 RNASE11Q8TAA1 199 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 AQP3Q92482 292 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 PRADC1Q9BSG0 188 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 ADAT1Q9BUB4 502 aaKnown RBP1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 NPCDR1Q9BY65 106 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 NIT2Q9NQR4 276 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 TMEM106BQ9NUM4 274 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 EPDR1Q9UM22 224 aa1.68□□□□□ -2.14
SHCBP1-206ENST00000567698 MYO5AQ9Y4I1 1855 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms