RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ZNF362Q5T0B9 420 aaPredicted RBP11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 LYZL1Q6UWQ5 148 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 SPOCK3Q9BQ16 436 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 PSPNO60542 156 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 ZNF479Q96JC4 524 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 LSM4Q9Y4Z0 139 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 CRIM1Q9NZV1 1036 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 A0A0G2JNJ9 132 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 ZNF138P52744 262 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 Q9UFV3 132 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 TMEM238C9JI98 176 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 IGFL4Q6B9Z1 124 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 TEX43Q6ZNM6 134 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 DTX1Q86Y01 620 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 C1orf159Q96HA4 380 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 TRAV3A0A0B4J244 114 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 INSP01308 110 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 DMRTC2Q8IXT2 367 aaPredicted RBP11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 CD5P06127 495 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 Q8TAT8 98 aa11.16□□□□□ -0.62
CX3CL1-204ENST00000565912 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 ABCA7Q8IZY2 2146 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 SLC25A48Q6ZT89 311 aaKnown RBP11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 OOSP1A8MZH6 123 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 F8WEM9 126 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 RASL10AQ92737 203 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 NABP1Q96AH0 204 aa11.15□□□□□ -0.62
CX3CL1-204ENST00000565912 IGKV1-27A0A075B6S5 117 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 F8VVB4 439 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 F8VWA3 439 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 SRSF4Q08170 494 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 UNQ6494/PRO21346Q6UXR6 183 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 DEFB130BP0DP73 79 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 DEFB130AP0DP74 79 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 HIST1H4AP62805 103 aaKnown RBP11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 ERCC8Q13216 396 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 SH2D1AO60880 128 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 LY6HO94772 140 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 SAMD5Q5TGI4 173 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 GFI1Q99684 422 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 MGST2Q99735 147 aa11.14□□□□□ -0.63
CX3CL1-204ENST00000565912 GVINP1Q7Z2Y8 2422 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 BUB1B-PAK6H3BSN5 160 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 C14orf178Q8N769 122 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 TRGV9Q99603 122 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 RNF5Q99942 180 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 H0YJW9 148 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 HSD52Q0P140 79 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 TRAV13-1A0A0B4J241 112 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 RNF166Q96A37 237 aaPredicted RBP11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 PLEKHB2Q96CS7 222 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 C1QTNF4Q9BXJ3 329 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 ALPK2Q86TB3 2170 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 M0R1W7 72 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 VCYO14598 125 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 Q0VFX4 171 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
CX3CL1-204ENST00000565912 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 COL8A2P25067 703 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 TMEM155Q4W5P6 130 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 GAFA1Q96PS6 74 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 CSTL1Q9H114 145 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 RALGAPA1Q6GYQ0 2036 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 MST1P26927 711 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 USMG5Q96IX5 58 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 NDUFAF3Q9BU61 184 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 AGMATQ9BSE5 352 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 J3QRE1 110 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 MPZP25189 248 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 NAA38Q9BRA0 125 aaKnown RBP11.12□□□□□ -0.63
CX3CL1-204ENST00000565912 HGFACQ04756 655 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms