RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 LINC01559Q495D7 138 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 TEX36Q5VZQ5 186 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 LHFPL4Q7Z7J7 247 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 PIP4P1Q86T03 277 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 WDR86Q86TI4 376 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.64□□□□□ -1.51
AP4E1-203ENST00000560508 ORMDL2Q53FV1 153 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 EXOC3-AS1Q8N2X6 119 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 ZNF256Q9Y2P7 627 aaPredicted RBP5.64□□□□□ -1.51
AP4E1-203ENST00000560508 B4DSR2 109 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 RPL15P61313 204 aaKnown RBP5.64□□□□□ -1.51
AP4E1-203ENST00000560508 SUMO2P61956 95 aaKnown RBP5.64□□□□□ -1.51
AP4E1-203ENST00000560508 C17orf58Q2M2W7 97 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 COL4A3Q01955 1670 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 RP1P56715 2156 aa5.64□□□□□ -1.51
AP4E1-203ENST00000560508 TRAV8-6A0A0B4J262 113 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 ZNF503-AS2A6NEH8 195 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 DPM2O94777 84 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 CEACAM8P31997 349 aaPredicted RBP5.63□□□□□ -1.51
AP4E1-203ENST00000560508 TMEM219Q86XT9 240 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 NDUFS8O00217 210 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 SH2D1AO60880 128 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 TCRAP04437 139 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 LINC01356Q8N9X3 169 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 EVI2AP22794 236 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 LINC00205P59089 165 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 KRTAP27-1Q3LI81 207 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 YLPM1P49750 1951 aaKnown RBP5.63□□□□□ -1.51
AP4E1-203ENST00000560508 SLC25A16P16260 332 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 Q6ZRM9 215 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 DTX1Q86Y01 620 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 HIST1H2BLQ99880 126 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 DERL1Q9BUN8 251 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 ASCC3Q8N3C0 2202 aaKnown RBP5.63□□□□□ -1.51
AP4E1-203ENST00000560508 TRAV9-2A0A087WT02 112 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 LINC01549A6NIU2 74 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 MST1LQ2TV78 715 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 Q6ZR03 302 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 TTC9CQ8N5M4 171 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 TMEM75Q8N9X5 138 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 MRPL16Q9NX20 251 aaKnown RBP5.63□□□□□ -1.51
AP4E1-203ENST00000560508 CHTOPQ9Y3Y2 248 aaKnown RBP5.63□□□□□ -1.51
AP4E1-203ENST00000560508 CA1P00915 261 aaPredicted RBP5.63□□□□□ -1.51
AP4E1-203ENST00000560508 LAGE3Q14657 143 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 ST6GALNAC6Q969X2 333 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 PRDM13Q9H4Q3 707 aa5.63□□□□□ -1.51
AP4E1-203ENST00000560508 LOC102724200A0A096LPH7 203 aaPredicted RBP5.62□□□□□ -1.51
AP4E1-203ENST00000560508 IGKCP01834 107 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 MRAP2Q96G30 205 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 SLC25A2Q9BXI2 301 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 GFRA4Q9GZZ7 299 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 SEC16AO15027 2179 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 FER1L5A0AVI2 2057 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 IGKV3OR2-268A0A0C4DH90 116 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 GZMBP10144 247 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 FBLN7Q53RD9 439 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 C9orf139Q6ZV77 190 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 NUP35Q8NFH5 326 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 LINC00477Q96M19 166 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 IGKV1-16P04430 117 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 IFI27P40305 119 aaPredicted RBP5.62□□□□□ -1.51
AP4E1-203ENST00000560508 ZNF138P52744 262 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 RSPO1Q2MKA7 263 aaPredicted RBP5.62□□□□□ -1.51
AP4E1-203ENST00000560508 RNF138Q8WVD3 245 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 NDUFA4L2Q9NRX3 87 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 ALPK3Q96L96 1907 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 ADCYAP1P18509 176 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 PRTN3P24158 256 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 PRR30Q53SZ7 412 aaPredicted RBP5.62□□□□□ -1.51
AP4E1-203ENST00000560508 KNL1Q8NG31 2342 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 C15orf65H3BRN8 121 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 LCN12Q6JVE5 192 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 LINC00311Q8N616 119 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 MS4A6AQ9H2W1 248 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 CYSLTR1Q9Y271 337 aa5.62□□□□□ -1.51
AP4E1-203ENST00000560508 DKK1O94907 266 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 SRD5A1P18405 259 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 PI4KAP42356 2102 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 NPIPB5A8MRT5 1133 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 PAX9P55771 341 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 FAM90A2PQ658T7 463 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 SHANK2-AS3Q9BTD1 123 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 URB1O60287 2271 aaKnown RBP5.61□□□□□ -1.51
AP4E1-203ENST00000560508 H3BUX3 64 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 AMBPP02760 352 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 GATA3P23771 443 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 UBE2E1P51965 193 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 PDE6HQ13956 83 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 LYZL1Q6UWQ5 148 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 ARL6IP6Q8N6S5 226 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 TRGV2A0A075B6R0 118 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 A0A1W2PPI3 338 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 SAA4P35542 130 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 NDUFAF3Q9BU61 184 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 VCX2Q9H322 139 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 SMPXQ9UHP9 88 aa5.61□□□□□ -1.51
AP4E1-203ENST00000560508 PPIFP30405 207 aaKnown RBP5.6□□□□□ -1.51
AP4E1-203ENST00000560508 IGF2-ASQ6U949 168 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms