RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 IGKV1D-42A0A075B6H8 117 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 DUXBA0A1W2PPF3 345 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 RIIAD1A6NNX1 92 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 E5RI56 91 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 GPR31O00270 319 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 HAND1O96004 215 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 DNAL4O96015 105 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 IGKV1-5P01602 117 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 TCRBP04435 133 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 HSD11B1P28845 292 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 PHBP35232 272 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 NDUFA6P56556 154 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 PIGPP57054 158 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 DEFA1P59665 94 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 CDK6Q00534 326 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 CIRBPQ14011 172 aaKnown RBP0.57□□□□□ -2.32
USP44-207ENST00000552237 ZNF846Q147U1 533 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 MPV17LQ2QL34 196 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 C12orf74Q32Q52 190 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 LINC01554Q52M75 96 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 GDF5OSQ5U4N7 250 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 TRIQKQ629K1 86 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 C22orf39Q6P5X5 142 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 GOLT1AQ6ZVE7 132 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 LCA10Q71F78 164 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 GKN2Q86XP6 184 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 ZGRF1Q86YA3 2104 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 CLECL1Q8IZS7 167 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 FAM19A2Q8N3H0 131 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 C12orf45Q8N5I9 185 aaPredicted RBP0.57□□□□□ -2.32
USP44-207ENST00000552237 Q8N814 137 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 OR11H6Q8NGC7 330 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 OR10AC1Q8NH08 325 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 OR4K15Q8NH41 348 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 OR10J5Q8NHC4 309 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 KLK6Q92876 244 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 SLAMF6Q96DU3 332 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 AP1S3Q96PC3 154 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 MCEEQ96PE7 176 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 PRADC1Q9BSG0 188 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 PBOV1Q9GZY1 135 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 TLNRD1Q9H1K6 362 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 PARVBQ9HBI1 364 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 BCL2L10Q9HD36 194 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 RNF11Q9Y3C5 154 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 PTPRFP10586 1907 aa0.57□□□□□ -2.32
USP44-207ENST00000552237 MED1Q15648 1581 aaPredicted RBP0.57□□□□□ -2.32
USP44-207ENST00000552237 NUP210LQ5VU65 1888 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 FREM3P0C091 2139 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 CAMSAP2Q08AD1 1489 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 A0A087WUJ7 227 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 TRBV6-8A0A0A6YYG3 113 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 FAM236DA0A1B0GTK5 79 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 TCRBV4S1A1TA0A5B7 111 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 SMIM9A6NGZ8 99 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 OR2T8A6NH00 312 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 C5orf58C9J3I9 102 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 F8W1H4 67 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 H3BQV1 296 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 M0R233 179 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 PIAS1O75925 651 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 ERC2-IT1O76042 136 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 GADD45GO95257 159 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 ZNF682O95780 498 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 DHFRP00374 187 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 IFNA1P01562 189 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 FAM236CP0DP71 79 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 CRYGAP11844 174 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 OGNP20774 298 aaKnown RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 NFYBP25208 207 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 ZNF93P35789 620 aaPredicted RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 SSR2P43308 183 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 RAB5CP51148 216 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 RPS20P60866 119 aaKnown RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 NCALDP61601 193 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 HSPE1P61604 102 aaKnown RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 RRN3P1Q2M238 152 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 STX12Q86Y82 276 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 TMEM86BQ8N661 226 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 OR52L1Q8NGH7 329 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 MUCL1Q96DR8 90 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 TEX37Q96LM6 180 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 NPCDR1Q9BY65 106 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 TMEM138Q9NPI0 162 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 LYRM2Q9NU23 88 aaPredicted RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 MYO5AQ9Y4I1 1855 aaKnown RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 MYH3P11055 1940 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 ROCK1Q13464 1354 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 ATG2AQ2TAZ0 1938 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 ZFC3H1O60293 1989 aaKnown RBP0.56□□□□□ -2.32
USP44-207ENST00000552237 KIAA1549Q9HCM3 1950 aa0.56□□□□□ -2.32
USP44-207ENST00000552237 YTHDC2Q9H6S0 1430 aaKnown RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 TET1Q8NFU7 2136 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 NUP98P52948 1817 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 UNC13CQ8NB66 2214 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 TRAV12-1A0A0B4J245 112 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 C2orf70A6NJV1 201 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 ZNF736B4DX44 427 aaPredicted RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 TAX1BP3O14907 124 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 NCR3O14931 201 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms