RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NCOR1O75376 2440 aa13.77□□□□□ -0.21
SCARB1-205ENST00000538291 IGHV3-73A0A0B4J1V6 119 aa13.77□□□□□ -0.21
SCARB1-205ENST00000538291 CHCHD1Q96BP2 118 aaKnown RBP13.77□□□□□ -0.21
SCARB1-205ENST00000538291 F8VVB4 439 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 F8VWA3 439 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 IGHV4-39P01824 125 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 NHP2Q9NX24 153 aaKnown RBP13.76□□□□□ -0.21
SCARB1-205ENST00000538291 LINC00587B1AMM8 73 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 LAGE3Q14657 143 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 ZNF474Q6S9Z5 364 aaPredicted RBP13.76□□□□□ -0.21
SCARB1-205ENST00000538291 IFI27L1Q96BM0 104 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 CACNA1BQ00975 2339 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 WFDC1Q9HC57 220 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 SCN8AQ9UQD0 1980 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 GGTLC3B5MD39 225 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 GATA3P23771 443 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 GFI1Q99684 422 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 SLC25A2Q9BXI2 301 aa13.76□□□□□ -0.21
SCARB1-205ENST00000538291 IGHV3-53P01767 116 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 CD300EQ496F6 205 aaPredicted RBP13.75□□□□□ -0.21
SCARB1-205ENST00000538291 NIT1Q86X76 327 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 RNF223E7ERA6 249 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 SAA4P35542 130 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 RIPPLY3P57055 190 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 VSIRQ9H7M9 311 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 K7ENP7 123 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 GAS1P54826 345 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 PSME4Q14997 1843 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 A0A1B0GV90 55 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 CA1P00915 261 aaPredicted RBP13.75□□□□□ -0.21
SCARB1-205ENST00000538291 LINC01559Q495D7 138 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 RHPN1-AS1Q9BWJ2 59 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 ABCA4P78363 2273 aa13.75□□□□□ -0.21
SCARB1-205ENST00000538291 CLPSP04118 112 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 PRTN3P24158 256 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 COL6A6A6NMZ7 2263 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 IGHV3-64A0A075B6Q5 118 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 LY6HO94772 140 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 TCRAP04437 139 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 PRB4P10163 310 aaPredicted RBP13.74□□□□□ -0.21
SCARB1-205ENST00000538291 LHFPL1Q86WI0 220 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 UBE2E2Q96LR5 201 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 C11orf68Q9H3H3 251 aaKnown RBP13.74□□□□□ -0.21
SCARB1-205ENST00000538291 SMPXQ9UHP9 88 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 FXYD7P58549 80 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 B3GALT5-AS1P59052 145 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 C1QL4Q86Z23 238 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 ARID2Q68CP9 1835 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 DOCK4Q8N1I0 1966 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 H3BUT2 72 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 MSMBP08118 114 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 SEC11AP67812 179 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 SPATA31B1PQ5VZV4 182 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 SFTA2Q6UW10 78 aa13.74□□□□□ -0.21
SCARB1-205ENST00000538291 IGKV1D-17A0A075B6S4 117 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 HOXA3O43365 443 aaPredicted RBP13.73□□□□□ -0.21
SCARB1-205ENST00000538291 GZMBP10144 247 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 LYPD2Q6UXB3 125 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 PNRC2Q9NPJ4 139 aaKnown RBP13.73□□□□□ -0.21
SCARB1-205ENST00000538291 TRAV9-2A0A087WT02 112 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 E7EQL1 145 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 Q5PR19 223 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 THADAQ6YHU6 1953 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 TRBV6-6A0A0A6YYG2 114 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 TRAV8-2A0A0B4J237 113 aa13.73□□□□□ -0.21
SCARB1-205ENST00000538291 DAZ1Q9NQZ3 744 aaKnown RBP13.73□□□□□ -0.21
SCARB1-205ENST00000538291 FOXL1Q12952 345 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 RFNGQ9Y644 331 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 TEX43Q6ZNM6 134 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 MGST2Q99735 147 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 IGKV1-5P01602 117 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 RASL10AQ92737 203 aa13.72□□□□□ -0.21
SCARB1-205ENST00000538291 PAX4O43316 350 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 Q6P435 159 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 LAMTOR2Q9Y2Q5 125 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 ABCA1O95477 2261 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 TMEM238C9JI98 176 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 VCYO14598 125 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 LYZL1Q6UWQ5 148 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 DOCK6Q96HP0 2047 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 M0R2P5 195 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 TRPM7Q96QT4 1865 aa13.71□□□□□ -0.21
SCARB1-205ENST00000538291 NCR2O95944 276 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 TOMM40O96008 361 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 TMEM249Q2WGJ8 235 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 POLEQ07864 2286 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 OVOL3O00110 214 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 TNFSF13O75888 250 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 SYNJ2BPP57105 145 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 LYPD1Q8N2G4 141 aa13.71□□□□□ -0.22
SCARB1-205ENST00000538291 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 PLEKHB2Q96CS7 222 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 AGMATQ9BSE5 352 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 FGF16O43320 207 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 CDK2AP2O75956 126 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 TMEM14EPQ6UXP3 125 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms