RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 ERVK-16P61578 105 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 CT83Q5H943 113 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF418Q8TF45 676 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 TPRP12270 2363 aaKnown RBP9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 CHEK1O14757 476 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF329Q86UD4 541 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 TMEM116Q8NCL8 245 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 Q8TCH9 128 aa9.18□□□□□ -0.94
SEMA4D-221ENST00000537934 CACNA1DQ01668 2161 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 TRAV3A0A0B4J244 114 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 A0A1W2PRD5 423 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 A0A1W2PRF3 423 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 A0A1W2PRM7 423 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 UBE2L3P68036 154 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 LGALS9BQ3B8N2 356 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF479Q96JC4 524 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 PGLYRP4Q96LB8 373 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 PRSS22Q9GZN4 317 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 GFRA4Q9GZZ7 299 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 ITPR1Q14643 2758 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 A0A096LPE4 126 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 A0A1W2PPZ6 126 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 CT45A6P0DMU7 189 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 CT45A5P0DMU8 189 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 CT45A7P0DMV0 189 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 ZNF137PP52743 207 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 CT45A1Q5HYN5 189 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 VKORC1L1Q8N0U8 176 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 CT45A3Q8NHU0 189 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 FAM167A-AS1Q96KT0 104 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 DKK4Q9UBT3 224 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 JPT1Q9UK76 154 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 POLDIP2Q9Y2S7 368 aa9.17□□□□□ -0.94
SEMA4D-221ENST00000537934 INTS1Q8N201 2190 aaKnown RBP9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 NBASA2RRP1 2371 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 KBTBD11-OT1A0A1B0GTJ5 212 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 RBPMS2Q6ZRY4 209 aaKnown RBP9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 PSPNO60542 156 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 CSN3P07498 182 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 CR1LQ2VPA4 569 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 C18orf15Q96N68 181 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
SEMA4D-221ENST00000537934 ATP5G2Q06055 141 aa9.15□□□□□ -0.94
SEMA4D-221ENST00000537934 ETDBQ3ZM63 59 aa9.15□□□□□ -0.94
SEMA4D-221ENST00000537934 SH2D6Q7Z4S9 175 aa9.15□□□□□ -0.94
SEMA4D-221ENST00000537934 ENY2Q9NPA8 101 aa9.15□□□□□ -0.94
SEMA4D-221ENST00000537934 ZGRF1Q86YA3 2104 aa9.15□□□□□ -0.94
SEMA4D-221ENST00000537934 IGKV1OR2-108A0A075B7D4 117 aa9.15□□□□□ -0.95
SEMA4D-221ENST00000537934 ZNF503-AS2A6NEH8 195 aa9.15□□□□□ -0.95
SEMA4D-221ENST00000537934 C15orf61A6NNL5 157 aa9.15□□□□□ -0.95
SEMA4D-221ENST00000537934 HAX1O00165 279 aa9.15□□□□□ -0.95
SEMA4D-221ENST00000537934 C9orf106Q8NAJ2 232 aa9.15□□□□□ -0.95
SEMA4D-221ENST00000537934 RTL8AQ9BWD3 113 aa9.15□□□□□ -0.95
SEMA4D-221ENST00000537934 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 SRRM4A7MD48 611 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 E9PLD3 99 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 PROP1O75360 226 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 FXYD2P54710 66 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 WDR86Q86TI4 376 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 PCP2Q8IVA1 136 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 BCL6BQ8N143 479 aaPredicted RBP9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 RPRMLQ8N4K4 120 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 PRR14LQ5THK1 2151 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 IGHV3-43A0A0B4J1X8 118 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 P01737 135 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 IGHV3-43DP0DP04 118 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 GCSHP23434 173 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 HSPE1P61604 102 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 CNEP1R1Q8N9A8 125 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 Q8NA96 180 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 OR8A1Q8NGG7 326 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 ZNF502Q8TBZ5 544 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 ARPC1AQ92747 370 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 GPR82Q96P67 336 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 MLST8Q9BVC4 326 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 ZNF492Q9P255 531 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 HIGD1BQ9P298 99 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 PSG8Q9UQ74 426 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 CYSLTR1Q9Y271 337 aa9.14□□□□□ -0.95
SEMA4D-221ENST00000537934 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
SEMA4D-221ENST00000537934 DEFB108AA8MXU0 73 aa9.13□□□□□ -0.95
SEMA4D-221ENST00000537934 CEBPDP49716 269 aaPredicted RBP9.13□□□□□ -0.95
SEMA4D-221ENST00000537934 LINC00322Q6ZN03 302 aaPredicted RBP9.13□□□□□ -0.95
SEMA4D-221ENST00000537934 FOXA2Q9Y261 457 aaPredicted RBP9.13□□□□□ -0.95
SEMA4D-221ENST00000537934 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms