RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ID1P41134 155 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 HERV-K104P61576 105 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 HSPE1P61604 102 aaKnown RBP5.56□□□□□ -1.52
CD44-232ENST00000531118 EBLN2Q6P2I7 272 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 SLC35G3Q8N808 338 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 OR1S2Q8NGQ3 325 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 OR10J6PQ8NGY7 276 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 OR4A16Q8NH70 328 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 NTN5Q8WTR8 489 aaPredicted RBP5.56□□□□□ -1.52
CD44-232ENST00000531118 BORCS5Q969J3 196 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 C16orf74Q96GX8 76 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 DOK5Q9P104 306 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 DAPK2Q9UIK4 370 aa5.56□□□□□ -1.52
CD44-232ENST00000531118 TRAV30A0A087WSZ9 112 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 A0A087WXM4 84 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 LOC100506127A0A0U1RQW1 187 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 DIRC3C9JPN6 131 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 INS-IGF2F8WCM5 200 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 H3BNG1 76 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 PGLYRP1O75594 196 aaPredicted RBP5.55□□□□□ -1.52
CD44-232ENST00000531118 NXPH4O95158 308 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 SNCAP37840 140 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 DHODHQ02127 395 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 ODF1Q14990 250 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 NEDD8Q15843 81 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 SPINK13Q1W4C9 94 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 Q6ZSA8 131 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 OR11H7Q8NGC8 314 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 SEC22AQ96IW7 307 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 FXYD6Q9H0Q3 95 aa5.55□□□□□ -1.52
CD44-232ENST00000531118 A0A096LPF7 62 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 IGKV1-39P01597 117 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 C1QBP02746 253 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 IGKV1D-39P04432 117 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 ELK1P19419 428 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 SDC2P34741 201 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 NUP62P37198 522 aaPredicted RBP5.54□□□□□ -1.52
CD44-232ENST00000531118 RND2P52198 227 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 YPEL3P61236 119 aaPredicted RBP5.54□□□□□ -1.52
CD44-232ENST00000531118 B2MP61769 119 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 SFXN4Q6P4A7 337 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 HOGA1Q86XE5 327 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 LINC00612Q8N6U2 182 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 OR6F1Q8NGZ6 308 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 Q8WTZ3 238 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 MRGPRFQ96AM1 343 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
CD44-232ENST00000531118 NOP10Q9NPE3 64 aaKnown RBP5.54□□□□□ -1.52
CD44-232ENST00000531118 TIMM8BQ9Y5J9 83 aaPredicted RBP5.54□□□□□ -1.52
CD44-232ENST00000531118 ISLRO14498 428 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 FCER2P06734 321 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 OR10J1P30954 320 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 RPL5P46777 297 aaKnown RBP5.53□□□□□ -1.52
CD44-232ENST00000531118 MXD1Q05195 221 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 IDNKQ5T6J7 187 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 RNASE8Q8TDE3 154 aaKnown RBP5.53□□□□□ -1.52
CD44-232ENST00000531118 LINC00467Q9BRT7 94 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 DIABLOQ9NR28 239 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 RPRMQ9NS64 109 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 MSRB1Q9NZV6 116 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 KLK11Q9UBX7 282 aa5.53□□□□□ -1.52
CD44-232ENST00000531118 TRAV12-2A0A075B6T6 113 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 A0A0A6YYH2 397 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 SMIM30A4D0T7 59 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 A6NJ64 397 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 BOLA2-SMG1P6H3BVE0 249 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 GPR31O00270 319 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 ADAP1O75689 374 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 TOMM40O96008 361 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 ASIPP42127 132 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 CNN1P51911 297 aaKnown RBP5.52□□□□□ -1.53
CD44-232ENST00000531118 SUB1P53999 127 aaKnown RBP eCLIP5.52□□□□□ -1.53
CD44-232ENST00000531118 TAS2R60P59551 318 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 IZUMO4Q1ZYL8 232 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 BSXQ3C1V8 233 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 PRSS54Q6PEW0 395 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 OR51G1Q8NGK1 321 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 TMEM263Q8WUH6 116 aaKnown RBP5.52□□□□□ -1.53
CD44-232ENST00000531118 VSIG2Q96IQ7 327 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 FAM212BQ9NTI7 297 aaPredicted RBP5.52□□□□□ -1.53
CD44-232ENST00000531118 RHBDL2Q9NX52 303 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 EHFQ9NZC4 300 aa5.52□□□□□ -1.53
CD44-232ENST00000531118 LRCOL1A6NCL2 159 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 RAP2BP61225 183 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 SUPT4H1P63272 117 aaKnown RBP5.51□□□□□ -1.53
CD44-232ENST00000531118 PHLDA2Q53GA4 152 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 SAMD13Q5VXD3 122 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 OR8G2PQ6IF36 304 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 SCXQ7RTU7 201 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 TMEM144Q7Z5S9 345 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 TMED4Q7Z7H5 227 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 CMTM1Q8IZ96 169 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 TMEM256Q8N2U0 113 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 Q8N814 137 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 OR5AP2Q8NGF4 316 aa5.51□□□□□ -1.53
CD44-232ENST00000531118 S100A16Q96FQ6 103 aaKnown RBP5.51□□□□□ -1.53
CD44-232ENST00000531118 LINC01587Q99440 93 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms