RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 NMSQ5H8A3 153 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 HLA-DQA1Q5Y7H0 255 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 ZNF101Q8IZC7 436 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 C6orf223Q8N319 242 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 STAG3L4Q8TBR4 150 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 PRSS27Q9BQR3 290 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 Q9UFV3 132 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 CCL26Q9Y258 94 aa2.89□□□□□ -1.95
PTPN22-207ENST00000528414 SDK2Q58EX2 2172 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TRAV9-2A0A087WT02 112 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TRAV13-1A0A0B4J241 112 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TRBV7-6A0A0J9YX20 115 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TRBV5-5A0A0J9YX44 114 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TLCD2A6NGC4 264 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SDCBPO00560 298 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 RRHO14718 337 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SS18L1O75177 396 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 LYZL6O75951 148 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 APOMO95445 188 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 FABP2P12104 132 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TPT1P13693 172 aaKnown RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SDC2P34741 201 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 RBMXP38159 391 aaKnown RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TAS2R45P59539 299 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TAS2R19P59542 299 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 ECSCRQ19T08 205 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 FRG2Q64ET8 278 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SLC25A34Q6PIV7 304 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 HMGN2P46Q86SG4 172 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 GTSCR1Q86UQ5 136 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 RPP25LQ8N5L8 163 aaKnown RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 LINC00337Q8N6G1 96 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 CMTM2Q8TAZ6 248 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 ITLN2Q8WWU7 325 aaPredicted RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 CCL17Q92583 94 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 RITA1Q96K30 269 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 PGLYRP2Q96PD5 576 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SIX2Q9NPC8 291 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 PLA2G2EQ9NZK7 142 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 HES2Q9Y543 173 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 CACNA1EQ15878 2313 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TRBV19A0A075B6N1 114 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 PATE3B3GLJ2 98 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 H3BMG7 143 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 K7ESM1 405 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 CACNG7P62955 275 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 RPS21P63220 83 aaKnown RBP2.88□□□□□ -1.95
PTPN22-207ENST00000528414 ARL16Q0P5N6 197 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 CST6Q15828 149 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SLC25A42Q86VD7 318 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 ZNF555Q8NEP9 628 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 TMEM70Q9BUB7 260 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 SMDT1Q9H4I9 107 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 KCNE3Q9Y6H6 103 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 UNC80Q8N2C7 3258 aa2.88□□□□□ -1.95
PTPN22-207ENST00000528414 H3BP45 60 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 PTHP01270 115 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 CD55P08174 381 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 RIGQ13278 110 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 KLF9Q13886 244 aaPredicted RBP2.87□□□□□ -1.95
PTPN22-207ENST00000528414 FAM19A3Q7Z5A8 133 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 OR52P1PQ8NH57 321 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 IGKV1D-43A0A0B4J1Z2 117 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 IGKV1D-13A0A0B4J2D9 117 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 C3orf85A0A1B0GTC6 90 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 TCL1BO95988 128 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 IGKV1-13P0DP09 117 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 PIK3CD-AS1Q5SR53 167 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 COMMD6Q7Z4G1 85 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 OR8B3Q8NGG8 313 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 SCGB1C1Q8TD33 95 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 GPHA2Q96T91 129 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 OR2W1Q9Y3N9 320 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 HEATR5AQ86XA9 2040 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 FBN3Q75N90 2809 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 KLLNB2CW77 178 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 F5H697 171 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 TIMM23O14925 209 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 SNCGO76070 127 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 HLA-DRB4P13762 266 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 HLA-DMBP28068 263 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 ASIPP42127 132 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 PSMB3P49720 205 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 SMCPP49901 116 aaPredicted RBP2.87□□□□□ -1.95
PTPN22-207ENST00000528414 FUT5Q11128 374 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 PMCHL1Q16048 86 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 RUSC1-AS1Q66K80 236 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 TMEM75Q8N9X5 138 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 OR5H2Q8NGV7 314 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 GTSF1Q8WW33 167 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 RNF185Q96GF1 192 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 HLA-DRB4X5D2U9 266 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 NINQ8N4C6 2090 aa2.87□□□□□ -1.95
PTPN22-207ENST00000528414 ANKRD12Q6UB98 2062 aa2.86□□□□□ -1.95
PTPN22-207ENST00000528414 DOCK9Q9BZ29 2069 aa2.86□□□□□ -1.95
PTPN22-207ENST00000528414 TRBV7-7A0A0K0K1E9 115 aa2.86□□□□□ -1.95
PTPN22-207ENST00000528414 A8MWL6 223 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms