RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
ATM-208ENST00000525537 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
ATM-208ENST00000525537 ST6GALNAC3Q8NDV1 305 aa2.82□□□□□ -1.96
ATM-208ENST00000525537 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
ATM-208ENST00000525537 BORCS8Q96FH0 119 aa2.82□□□□□ -1.96
ATM-208ENST00000525537 ADAT1Q9BUB4 502 aaKnown RBP2.82□□□□□ -1.96
ATM-208ENST00000525537 BCL2L10Q9HD36 194 aa2.82□□□□□ -1.96
ATM-208ENST00000525537 TRAV5A0A0B4J249 113 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 H7BYZ3 331 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 ZNF737O75373 536 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 CXCL1P09341 107 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 TMBIM6P55061 237 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 EIF5AL1Q6IS14 154 aaKnown RBP2.81□□□□□ -1.96
ATM-208ENST00000525537 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 C6orf62Q9GZU0 229 aaPredicted RBP2.81□□□□□ -1.96
ATM-208ENST00000525537 OTORQ9NRC9 128 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 PXDNLA1KZ92 1463 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 NCAPD3P42695 1498 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 PLXNA3P51805 1871 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 ICE1Q9Y2F5 2266 aa2.81□□□□□ -1.96
ATM-208ENST00000525537 CEP164Q9UPV0 1460 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 ODAMA1E959 279 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 RPL7P18124 248 aaKnown RBP2.8□□□□□ -1.96
ATM-208ENST00000525537 S100A11P31949 105 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 ARPP19P56211 112 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 MSMO1Q15800 293 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 LINC00471Q8N535 108 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 SLC25A21Q9BQT8 299 aaPredicted RBP2.8□□□□□ -1.96
ATM-208ENST00000525537 RNF11Q9Y3C5 154 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 MED31Q9Y3C7 131 aa2.8□□□□□ -1.96
ATM-208ENST00000525537 NUP98P52948 1817 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 ARL5CA6NH57 179 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 A8MWV9 139 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 J3QRE1 110 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 TIMM17BO60830 172 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 CST7O76096 145 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 BAALC-AS2P0C853 105 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 P0DMU3 169 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 FAM231AP0DMU4 169 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 FAM231CP0DMU5 169 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 ESRGQ1W209 222 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 PHF5AQ7RTV0 110 aaKnown RBP2.79□□□□□ -1.96
ATM-208ENST00000525537 LINC00467Q9BRT7 94 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 CST9LQ9H4G1 147 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 HS3ST2Q9Y278 367 aa2.79□□□□□ -1.96
ATM-208ENST00000525537 DISP1Q96F81 1524 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 MDC1Q14676 2089 aaKnown RBP2.78□□□□□ -1.96
ATM-208ENST00000525537 ARAP1Q96P48 1450 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 BCL9O00512 1426 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 NUP210Q8TEM1 1887 aaPredicted RBP2.78□□□□□ -1.96
ATM-208ENST00000525537 KPNA4O00629 521 aaPredicted RBP2.78□□□□□ -1.96
ATM-208ENST00000525537 UBBP0CG47 229 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 MIFP14174 115 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 KRTAP10-1P60331 282 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 RPS28P62857 69 aaKnown RBP2.78□□□□□ -1.96
ATM-208ENST00000525537 EIF3IQ13347 325 aaKnown RBP2.78□□□□□ -1.96
ATM-208ENST00000525537 SLC50A1Q9BRV3 221 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 OR2H1Q9GZK4 316 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 NAT8BQ9UHF3 227 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 GLI3P10071 1580 aa2.78□□□□□ -1.96
ATM-208ENST00000525537 MEIKINA0A087WXM9 373 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 GABARAPH6UMI1 98 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 GADD45GO95257 159 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 OR10J4P0C629 311 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 MGST1P10620 155 aaKnown RBP2.77□□□□□ -1.97
ATM-208ENST00000525537 RPS3P23396 243 aaKnown RBP eCLIP2.77□□□□□ -1.97
ATM-208ENST00000525537 HBBP68871 147 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 ZNF846Q147U1 533 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 ELOBQ15370 118 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 HRCT1Q6UXD1 115 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 ZNF418Q8TF45 676 aaPredicted RBP2.77□□□□□ -1.97
ATM-208ENST00000525537 TAS2R7Q9NYW3 318 aa2.77□□□□□ -1.97
ATM-208ENST00000525537 TRAV3A0A0B4J244 114 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 TRAV1-1A0A0B4J248 108 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 OVOL1O14753 267 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 SARNPP82979 210 aaKnown RBP2.76□□□□□ -1.97
ATM-208ENST00000525537 PATE2Q6UY27 113 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 ZNF714Q96N38 554 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 SPANXCQ9NY87 97 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 JPT1Q9UK76 154 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 TRAPPC2LQ9UL33 140 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 N4BP2Q86UW6 1770 aaPredicted RBP2.76□□□□□ -1.97
ATM-208ENST00000525537 MYH10P35580 1976 aa2.76□□□□□ -1.97
ATM-208ENST00000525537 CACNA1GO43497 2377 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 TAF1LQ8IZX4 1826 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 A0A087WX48 190 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 J3KT08 172 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 ARPC5O15511 151 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 RPL35P42766 123 aaKnown RBP2.75□□□□□ -1.97
ATM-208ENST00000525537 Q1T7F1 81 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 Q8IYB0 196 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 TCEAL2Q9H3H9 227 aaPredicted RBP2.75□□□□□ -1.97
ATM-208ENST00000525537 CACYBPQ9HB71 228 aaKnown RBP2.75□□□□□ -1.97
ATM-208ENST00000525537 ZCCHC6Q5VYS8 1495 aaKnown RBP2.75□□□□□ -1.97
ATM-208ENST00000525537 TRAPPC8Q9Y2L5 1435 aa2.75□□□□□ -1.97
ATM-208ENST00000525537 STRCP1A6NGW2 1772 aa2.74□□□□□ -1.97
ATM-208ENST00000525537 K7ERJ3 54 aa2.74□□□□□ -1.97
ATM-208ENST00000525537 DEGS1O15121 323 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms