RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 CD24P25063 80 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NFYBP25208 207 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FKBP2P26885 142 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PSMB8P28062 276 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SDC2P34741 201 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPL22P35268 128 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPL35P42766 123 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GUCA1AP43080 201 aaPredicted RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CSN1S1P47710 185 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 GNG4P50150 75 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RBM11P57052 281 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FXYD7P58549 80 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 COPZ1P61923 177 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LSM3P62310 102 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PPP3R1P63098 170 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 UBE2BP63146 152 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 EIF5AP63241 154 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 BTG2P78543 158 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 QRFPP83859 136 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MYL5Q02045 173 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 BSPH1Q075Z2 132 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SLC38A11Q08AI6 406 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR8G1Q15617 311 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM241Q24JQ0 296 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LGALS9BQ3B8N2 356 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MRPL51Q4U2R6 128 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM155Q4W5P6 130 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC01554Q52M75 96 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OCIAD2Q56VL3 154 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AADACL3Q5VUY0 350 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 Q5XG85 94 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LGALS9CQ6DKI2 356 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LAIR2Q6ISS4 152 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C22orf39Q6P5X5 142 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RASL11AQ6T310 242 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 AMTNQ6UX39 209 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM14EPQ6UXP3 125 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 Q6ZQT7 251 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SSX8Q7RTT4 187 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PHF5AQ7RTV0 110 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LYZL2Q7Z4W2 148 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CTAGE3PQ8IX95 158 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C8orf59Q8N0T1 100 aaPredicted RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 RPP25LQ8N5L8 163 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZFAND2AQ8N6M9 145 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TCTEX1D1Q8N7M0 179 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR11G2Q8NGC1 345 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR5A2Q8NGI9 324 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR2T10Q8NGZ9 312 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR10AC1Q8NH08 325 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR4K13Q8NH42 304 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 OR4A5Q8NH83 315 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PPTC7Q8NI37 304 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FNDC9Q8TBE3 224 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NAT14Q8WUY8 206 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ITLN2Q8WWU7 325 aaPredicted RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MAL2Q969L2 176 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HIST1H2BAQ96A08 127 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MCEEQ96PE7 176 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TP53RKQ96S44 253 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PSMG3Q9BT73 122 aaPredicted RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 UPK3BQ9BT76 320 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DERL1Q9BUN8 251 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SMIM3Q9BZL3 60 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TMEM191AQ9H0A3 160 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LPAR5Q9H1C0 372 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C11orf1Q9H5F2 150 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CACYBPQ9HB71 228 aaKnown RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FAM60AQ9NP50 221 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SLC39A9Q9NUM3 307 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IL36BQ9NZH7 164 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 CCDC167Q9P0B6 97 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 NAT8Q9UHE5 227 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PCTPQ9UKL6 214 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SNX12Q9UMY4 172 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 FUT9Q9Y231 359 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ZFP30Q9Y2G7 519 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 LINC00588Q9Y4M8 146 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PHLDA3Q9Y5J5 127 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRAPPC1Q9Y5R8 145 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 SOX21Q9Y651 276 aaPredicted RBP0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PTPRSQ13332 1948 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MYLKQ15746 1914 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PHIPQ8WWQ0 1821 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KIAA1551Q9HCM1 1747 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KIAA1107Q9UPP5 1409 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 DSPPQ9NZW4 1301 aa0.63□□□□□ -2.31
SCARNA16.2-201ENST00000516520 QRICH2Q9H0J4 1663 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ADGRB1O14514 1584 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 HEATR5AQ86XA9 2040 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MYH1P12882 1939 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 MED14O60244 1454 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 PZPP20742 1482 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 KMT2BQ9UMN6 2715 aaPredicted RBP0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 ARHGEF28Q8N1W1 1705 aaKnown RBP0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1D-43A0A0B4J1Z2 117 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRAV13-1A0A0B4J241 112 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 IGKV1-9A0A0C4DH69 117 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 TRBV27A0A0K0K1C4 114 aa0.62□□□□□ -2.31
SCARNA16.2-201ENST00000516520 C7orf71A4D174 169 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms