RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 HIST1H1EP10412 219 aaKnown RBP13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 PRR27Q6MZM9 219 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 MRPL54Q6P161 138 aaKnown RBP13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 ZNF562Q6V9R5 426 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 NUDT10Q8NFP7 164 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 NUDT11Q96G61 164 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 FMC1Q96HJ9 113 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 TMEM68Q96MH6 324 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 SIRPDQ9H106 197 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
CLMAT3-201ENST00000510576 TOMM40O96008 361 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 UQCRFS1P47985 274 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 RAB4BP61018 213 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 PKIAP61925 76 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 USF2Q15853 346 aaPredicted RBP13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 C9orf152Q5JTZ5 239 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 Q8N6K4 173 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 FAM168AQ92567 244 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 GPR82Q96P67 336 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 IGHV2-70DA0A0C4DH43 119 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 NUPR1O60356 82 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 HLA-DQA1P01909 254 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 TCRAP04437 139 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 TMEM11P17152 192 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 GNLYP22749 145 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 EBI3Q14213 229 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 ZNF586Q9NXT0 402 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 TP53TG3Q9ULZ0 132 aa13.09□□□□□ -0.31
CLMAT3-201ENST00000510576 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 TSTD3H0UI37 97 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 Q0VG73 95 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 ASPHD1Q5U4P2 390 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 BAGE3Q86Y29 109 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 SGK494Q96LW2 274 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 SHANK2-AS3Q9BTD1 123 aa13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 TBL2Q9Y4P3 447 aaKnown RBP13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 SPTBN1Q01082 2364 aaKnown RBP13.08□□□□□ -0.32
CLMAT3-201ENST00000510576 CHD6Q8TD26 2715 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 IGLV11-55A0A075B6I3 123 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 H3BRN7 92 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 TOX4O94842 621 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 GNG7O60262 68 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 ESDP10768 282 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 MFAP4P55083 255 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 TPPP2P59282 170 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 PAFAH1B2P68402 229 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 RASL11AQ6T310 242 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 BPIFA4PQ86YQ2 179 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 TTC9CQ8N5M4 171 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 RNF24Q9Y225 148 aa13.07□□□□□ -0.32
CLMAT3-201ENST00000510576 C19orf84I3L1E1 186 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 SERF1AO75920 110 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 LTAP01374 205 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 IL4P05112 153 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 NDPQ00604 133 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 IQCJQ1A5X6 159 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 ZNF491Q8N8L2 437 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 OR4F17Q8NGA8 305 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 TSKUQ8WUA8 353 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 TMEM190Q8WZ59 177 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 ZNF48Q96MX3 618 aaPredicted RBP13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 MLST8Q9BVC4 326 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 PRO1933Q9H354 126 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 S4R3C0 116 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 ABCA1O95477 2261 aa13.06□□□□□ -0.32
CLMAT3-201ENST00000510576 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 LINC00310P59036 64 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 S100A7AQ86SG5 101 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 WIPF2Q8TF74 440 aaPredicted RBP13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 MS4A10Q96PG2 267 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 UBE2E1P51965 193 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 NUP35Q8NFH5 326 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 BPESC1Q9GZL8 116 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 THYN1Q9P016 225 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
CLMAT3-201ENST00000510576 APCSP02743 223 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 FAM106CPP0CH98 169 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 KIAA1644Q3SXP7 199 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 Q56UQ5 140 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 OR10J3Q5JRS4 329 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 Q86TA4 180 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 EXOC3-AS1Q8N2X6 119 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 TBX15Q96SF7 602 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 RPP21Q9H633 154 aaKnown RBP13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 C1RLQ9NZP8 487 aa13.04□□□□□ -0.32
CLMAT3-201ENST00000510576 TRBV19A0A075B6N1 114 aa13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 F2Z2F3 143 aa13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 SCGB1D1O95968 90 aa13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 HLA-DRB1P01911 266 aa13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 LMO4P61968 165 aa13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 DEFA6Q01524 100 aa13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 BBC3Q96PG8 261 aaPredicted RBP13.03□□□□□ -0.32
CLMAT3-201ENST00000510576 NEU1Q99519 415 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms