RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 PRELID1Q9Y255 219 aa10.34□□□□□ -0.75
LMNA-220ENST00000504687 TRAV5A0A0B4J249 113 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 IGHG4P01861 327 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 RAB9AP51151 201 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 LYZP61626 148 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 BTN1A1Q13410 526 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 TMEM241Q24JQ0 296 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 Q8N2B8 174 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 CCDC140Q96MF4 163 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 SMCO4Q9NRQ5 59 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 PUS1Q9Y606 427 aaKnown RBP eCLIP10.33□□□□□ -0.76
LMNA-220ENST00000504687 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
LMNA-220ENST00000504687 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 CXorf65A6NEN9 183 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 C9JCJ5 164 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 TGOLN2O43493 480 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 IL4P05112 153 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
LMNA-220ENST00000504687 UBE2G2P60604 165 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 C9orf152Q5JTZ5 239 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 PRSS22Q9GZN4 317 aa10.32□□□□□ -0.76
LMNA-220ENST00000504687 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 OR2T8A6NH00 312 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 GGTLC3B5MD39 225 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 M0R036 132 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 BMPR1BO00238 502 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 TSPAN4O14817 238 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 MRPS12O15235 138 aaKnown RBP10.31□□□□□ -0.76
LMNA-220ENST00000504687 TRGV3P03979 118 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 NBEAP1P0C6P0 100 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 RELQ04864 619 aaPredicted RBP10.31□□□□□ -0.76
LMNA-220ENST00000504687 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 USF2Q15853 346 aaPredicted RBP10.31□□□□□ -0.76
LMNA-220ENST00000504687 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 LYPD1Q8N2G4 141 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 CHRDL1Q9BU40 450 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 NPFFR1Q9GZQ6 430 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 CTDSP1Q9GZU7 261 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 VPS13CQ709C8 3753 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
LMNA-220ENST00000504687 AKAP9Q99996 3911 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 ABCA1O95477 2261 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
LMNA-220ENST00000504687 ZNF98A6NK75 572 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 HOXA3O43365 443 aaPredicted RBP10.3□□□□□ -0.76
LMNA-220ENST00000504687 NDUFB4O95168 129 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 CLEC3BP05452 202 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 OR10J4P0C629 311 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 PYYP10082 97 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 PSMB8P28062 276 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 GPR183P32249 361 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 CEBPGP53567 150 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 PDE6HQ13956 83 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 Q6ZS46 218 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 ARL6IP6Q8N6S5 226 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 RNF152Q8N8N0 203 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 C2CD4CQ8TF44 421 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 RPS10P5Q9NQ39 176 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 CCDC168Q8NDH2 2452 aa10.3□□□□□ -0.76
LMNA-220ENST00000504687 SCO2A0A1W2PP80 73 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 CLDN34H7C241 214 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 CD99P14209 185 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 HNF1AP20823 631 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 TPPP2P59282 170 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 RPL15P61313 204 aaKnown RBP10.29□□□□□ -0.76
LMNA-220ENST00000504687 RPL23P62829 140 aaKnown RBP10.29□□□□□ -0.76
LMNA-220ENST00000504687 TOMM20LQ6UXN7 152 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 C15orf54Q8N8G6 183 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 HIST1H2BAQ96A08 127 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 NOL4LQ96MY1 436 aaPredicted RBP10.29□□□□□ -0.76
LMNA-220ENST00000504687 GPR82Q96P67 336 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 ZNF702PQ9H963 129 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 S4R3C0 116 aa10.29□□□□□ -0.76
LMNA-220ENST00000504687 ZNF253O75346 499 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 S100A9P06702 114 aaKnown RBP10.28□□□□□ -0.76
LMNA-220ENST00000504687 RPL7P18124 248 aaKnown RBP10.28□□□□□ -0.76
LMNA-220ENST00000504687 TAS2R60P59551 318 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
LMNA-220ENST00000504687 C1orf194Q5T5A4 169 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 CLEC19AQ6UXS0 136 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 ZNF329Q86UD4 541 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 SIGLECL1Q8N7X8 197 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 OR4F17Q8NGA8 305 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 MYOZ3Q8TDC0 251 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 MS4A10Q96PG2 267 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 ELOVL1Q9BW60 279 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 OTORQ9NRC9 128 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 U3KQE9 123 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
LMNA-220ENST00000504687 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
LMNA-220ENST00000504687 SMAD7O15105 426 aaKnown RBP10.27□□□□□ -0.77
LMNA-220ENST00000504687 IGHV3-23P01764 117 aa10.27□□□□□ -0.77
LMNA-220ENST00000504687 ELANEP08246 267 aa10.27□□□□□ -0.77
LMNA-220ENST00000504687 FOXE3Q13461 319 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms