RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 OTORQ9NRC9 128 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 TACC2O95359 2948 aa10.29□□□□□ -0.76
GARNL3-220ENST00000496711 ABCA1O95477 2261 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 IZUMO1RA6ND01 250 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 OVOL3O00110 214 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 GNG7O60262 68 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 TCRAP04437 139 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 FRMD6-AS1P0C7T7 363 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 LMO4P61968 165 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 TMEM190Q8WZ59 177 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 MBD6Q96DN6 1003 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 FANCD2OSQ96PS1 177 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 ZNF586Q9NXT0 402 aa10.28□□□□□ -0.76
GARNL3-220ENST00000496711 A0A1B0GUS0 222 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 GRIFINA4D1Z8 144 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 SPINK4O60575 86 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.76
GARNL3-220ENST00000496711 AMY1AP04745 511 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 IL4P05112 153 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 FAM106CPP0CH98 169 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 CRISP2P16562 243 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 MFAP4P55083 255 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 PRR27Q6MZM9 219 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 ZNF491Q8N8L2 437 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 NUDT10Q8NFP7 164 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 NUDT11Q96G61 164 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 GRAMD2BQ96HH9 432 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 GPR82Q96P67 336 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 PRDM13Q9H4Q3 707 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 C1RLQ9NZP8 487 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 PKD1L2Q7Z442 2459 aa10.27□□□□□ -0.76
GARNL3-220ENST00000496711 WI2-2373I1.2A0A1W2PRP0 233 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 TMEM8BA6NDV4 472 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 LTAP01374 205 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 CTAG1AP78358 180 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 SLC35B1P78383 322 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 TMEM136Q6ZRR5 245 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 BPIFA4PQ86YQ2 179 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 TMEM256Q8N2U0 113 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 LPAR2Q9HBW0 351 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 THYN1Q9P016 225 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 NAT8BQ9UHF3 227 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 RNF24Q9Y225 148 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 S4R3C0 116 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 CACNA1AO00555 2505 aa10.27□□□□□ -0.77
GARNL3-220ENST00000496711 IGHV7-81A0A0B4J1V7 117 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 IGHV4-39P01824 125 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 HLA-DQA1P01909 254 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 HLA-DRB1P01911 266 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 GZMBP10144 247 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 BRS3P32247 399 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 SAA4P35542 130 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 USF2Q15853 346 aaPredicted RBP10.26□□□□□ -0.77
GARNL3-220ENST00000496711 MRPL54Q6P161 138 aaKnown RBP10.26□□□□□ -0.77
GARNL3-220ENST00000496711 S100A7AQ86SG5 101 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 Q8N9W7 124 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 OR4F17Q8NGA8 305 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 CMTM2Q8TAZ6 248 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 FAM168AQ92567 244 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 SGK494Q96LW2 274 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 MLST8Q9BVC4 326 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 C21orf62Q9NYP8 219 aa10.26□□□□□ -0.77
GARNL3-220ENST00000496711 Q56UQ5 140 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 RASL11AQ6T310 242 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 Q86TA4 180 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 TP53TG3Q9ULZ0 132 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 TRBV19A0A075B6N1 114 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 F8W735 103 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-220ENST00000496711 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 IGLC2P0DOY2 106 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 RAB4BP61018 213 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 WIPF2Q8TF74 440 aaPredicted RBP10.25□□□□□ -0.77
GARNL3-220ENST00000496711 TSKUQ8WUA8 353 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 ZNF492Q9P255 531 aa10.25□□□□□ -0.77
GARNL3-220ENST00000496711 NUPR1O60356 82 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 OR2J3O76001 311 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 GOSR1O95249 250 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 ESDP10768 282 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 EGR2P11161 476 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-220ENST00000496711 Q0VG73 95 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 EXOC3-AS1Q8N2X6 119 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
GARNL3-220ENST00000496711 ABCA2Q9BZC7 2435 aa10.24□□□□□ -0.77
GARNL3-220ENST00000496711 NPFFO15130 113 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 MRPS12O15235 138 aaKnown RBP10.23□□□□□ -0.77
GARNL3-220ENST00000496711 SERF1AO75920 110 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 NDUFB8O95169 186 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 FCGR2BP31994 310 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-220ENST00000496711 LINC00310P59036 64 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 LYPD1Q8N2G4 141 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 NUP35Q8NFH5 326 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 RPP21Q9H633 154 aaKnown RBP10.23□□□□□ -0.77
GARNL3-220ENST00000496711 POLR3KQ9Y2Y1 108 aaPredicted RBP10.23□□□□□ -0.77
GARNL3-220ENST00000496711 PIEZO1Q92508 2521 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 TRBV6-1A0A0K0K1D8 114 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 TPPP2P59282 170 aa10.23□□□□□ -0.77
GARNL3-220ENST00000496711 CT83Q5H943 113 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms