RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 LLPHQ9BRT6 129 aaKnown RBP1.2□□□□□ -2.22
VTA1-204ENST00000491881 CHST6Q9GZX3 395 aa1.2□□□□□ -2.22
VTA1-204ENST00000491881 NKIRAS1Q9NYS0 192 aa1.2□□□□□ -2.22
VTA1-204ENST00000491881 C3orf18Q9UK00 162 aa1.2□□□□□ -2.22
VTA1-204ENST00000491881 ANKRD50Q9ULJ7 1429 aa1.2□□□□□ -2.22
VTA1-204ENST00000491881 CD163L1Q9NR16 1453 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 KMT2DO14686 5537 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 LRRN3E7EW58 273 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 I3L521 148 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 CXCR6O00574 342 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 CIAO1O76071 339 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 KRT75O95678 551 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 TRGC1P0CF51 173 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 LYNX1P0DP58 116 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 MYL12AP19105 171 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 MAGEA2P43356 314 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 OR4D2P58180 307 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 AKAP6Q13023 2319 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 ACSM3Q53FZ2 586 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 TNFAIP8L3Q5GJ75 292 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 C1orf195Q5TG92 126 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 C7orf65Q6ZTY9 151 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 TMEM156Q8N614 296 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 RAB8BQ92930 207 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 TESCQ96BS2 214 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 CYSTM1Q9H1C7 97 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 RSL24D1Q9UHA3 163 aaKnown RBP1.19□□□□□ -2.22
VTA1-204ENST00000491881 ANGPT4Q9Y264 503 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 TIMM22Q9Y584 194 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 SOX21Q9Y651 276 aaPredicted RBP1.19□□□□□ -2.22
VTA1-204ENST00000491881 SIPA1L1O43166 1804 aa1.19□□□□□ -2.22
VTA1-204ENST00000491881 DOCK3Q8IZD9 2030 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 PTPRBP23467 1997 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 ASCC3Q8N3C0 2202 aaKnown RBP1.18□□□□□ -2.22
VTA1-204ENST00000491881 SPAARA0A1B0GVQ0 90 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 LST1O00453 97 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 LEPROTO15243 131 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 MSMBP08118 114 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 UCHL3P15374 230 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 KCNE1P15382 129 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 CCL1P22362 96 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 MAP2K4P45985 399 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 REG1BP48304 166 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 TNFAIP6P98066 277 aaPredicted RBP1.18□□□□□ -2.22
VTA1-204ENST00000491881 FP248Q71RG6 208 aaPredicted RBP1.18□□□□□ -2.22
VTA1-204ENST00000491881 GID4Q8IVV7 300 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 C10orf105Q8TEF2 133 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 MBD3L1Q8WWY6 194 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 ANKRD7Q92527 254 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 ROPN1LQ96C74 230 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 OPTNQ96CV9 577 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 MDC1Q14676 2089 aaKnown RBP1.18□□□□□ -2.22
VTA1-204ENST00000491881 ZGRF1Q86YA3 2104 aa1.18□□□□□ -2.22
VTA1-204ENST00000491881 ABCA1O95477 2261 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 IGKV2-40A0A087WW87 121 aaPredicted RBP1.17□□□□□ -2.22
VTA1-204ENST00000491881 LCE6AA0A183 80 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 MEIS3P1A6NDR6 274 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 IGKV2D-40P01614 121 aaPredicted RBP1.17□□□□□ -2.22
VTA1-204ENST00000491881 RPSAP08865 295 aaKnown RBP1.17□□□□□ -2.22
VTA1-204ENST00000491881 FAM228BP0C875 321 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 SULT1A3P0DMM9 295 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 SULT1A4P0DMN0 295 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 CAV1Q03135 178 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 EMX1Q04741 257 aaPredicted RBP1.17□□□□□ -2.22
VTA1-204ENST00000491881 COTL1Q14019 142 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 NUMA1Q14980 2115 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 ELOBQ15370 118 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 MOGQ16653 247 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 ARHGAP11BQ3KRB8 267 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 DYNAPQ8N1N2 210 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 OR1M1Q8NGA1 313 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 OR5B17Q8NGF7 314 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 SMR3AQ99954 134 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 PAQR5Q9NXK6 330 aaPredicted RBP1.17□□□□□ -2.22
VTA1-204ENST00000491881 CADP27708 2225 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 SCN10AQ9Y5Y9 1956 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 RTL1A6NKG5 1358 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 PTPRSQ13332 1948 aa1.17□□□□□ -2.22
VTA1-204ENST00000491881 CR1P17927 2039 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 MYO7AQ13402 2215 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 EDC4Q6P2E9 1401 aaKnown RBP1.16□□□□□ -2.22
VTA1-204ENST00000491881 ALMS1Q8TCU4 4167 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 IGKV3D-7A0A0C4DH55 119 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 IGKV3OR2-268A0A0C4DH90 116 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 EVPLLA8MZ36 301 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 SLC22A1O15245 554 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 NOS1APO75052 506 aaPredicted RBP1.16□□□□□ -2.22
VTA1-204ENST00000491881 SRP19P09132 144 aaKnown RBP1.16□□□□□ -2.22
VTA1-204ENST00000491881 HLA-DMBP28068 263 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 CCR7P32248 378 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 ZNF550Q7Z398 422 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 FUT9Q9Y231 359 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 DOCK2Q92608 1830 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 ATG2AQ2TAZ0 1938 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 ROS1P08922 2347 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 CPAMD8Q8IZJ3 1885 aa1.16□□□□□ -2.22
VTA1-204ENST00000491881 DIDO1Q9BTC0 2240 aaKnown RBP1.15□□□□□ -2.23
VTA1-204ENST00000491881 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
VTA1-204ENST00000491881 IGKV1D-43A0A0B4J1Z2 117 aa1.15□□□□□ -2.23
VTA1-204ENST00000491881 GGT3PA6NGU5 568 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms