RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 SMIM24O75264 130 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 CSN2P05814 226 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 COX6A1P12074 109 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 OGNP20774 298 aaKnown RBP2.24□□□□□ -2.05
CUL3-211ENST00000487558 DEFA3P59666 94 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 RPL13AP3Q6NVV1 102 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 NUP35Q8NFH5 326 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 OR4E2Q8NGC2 313 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 OR8J3Q8NGG0 315 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 ZNF563Q8TA94 476 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 VPS25Q9BRG1 176 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 LAMTOR2Q9Y2Q5 125 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 SOGA1O94964 1423 aa2.24□□□□□ -2.05
CUL3-211ENST00000487558 RFX7Q2KHR2 1363 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 GLI3P10071 1580 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 TRAV36DV7A0A075B6V5 113 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 A0A1B0GX51 115 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 DUXBA0A1W2PPF3 345 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 CLDN25C9JDP6 229 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 TPST1O60507 370 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 APOC1P02654 83 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 ZNF705BP0CI00 300 aaPredicted RBP2.23□□□□□ -2.05
CUL3-211ENST00000487558 PIGPP57054 158 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 RPS28P62857 69 aaKnown RBP2.23□□□□□ -2.05
CUL3-211ENST00000487558 OR8B8Q15620 311 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 WHAMMP3Q1A5X7 153 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 Q1T7F1 81 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 LINC00471Q8N535 108 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 C9orf163Q8N9P6 203 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 OR5A1Q8NGJ0 315 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 C1orf54Q8WWF1 131 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 OR2J1Q9GZK6 312 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 RNF122Q9H9V4 155 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 OSTCQ9NRP0 149 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 AMMECR1Q9Y4X0 333 aaPredicted RBP2.23□□□□□ -2.05
CUL3-211ENST00000487558 ROCK2O75116 1388 aaKnown RBP2.23□□□□□ -2.05
CUL3-211ENST00000487558 DENND4CQ5VZ89 1909 aa2.23□□□□□ -2.05
CUL3-211ENST00000487558 FANCMQ8IYD8 2048 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 COL11A1P12107 1806 aaPredicted RBP2.22□□□□□ -2.05
CUL3-211ENST00000487558 PTPRBP23467 1997 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 TMEM189A5PLL7 270 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 MIF4GDA9UHW6 222 aaKnown RBP2.22□□□□□ -2.05
CUL3-211ENST00000487558 C5orf58C9J3I9 102 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 UBBP0CG47 229 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 NNATQ16517 81 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 LTC4SQ16873 150 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 LINC01554Q52M75 96 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 FP248Q71RG6 208 aaPredicted RBP2.22□□□□□ -2.05
CUL3-211ENST00000487558 ISOC1Q96CN7 298 aa2.22□□□□□ -2.05
CUL3-211ENST00000487558 ADAT3Q96EY9 351 aaPredicted RBP2.22□□□□□ -2.05
CUL3-211ENST00000487558 NAA38Q9BRA0 125 aaKnown RBP2.22□□□□□ -2.05
CUL3-211ENST00000487558 RIMS1Q86UR5 1692 aaKnown RBP2.22□□□□□ -2.05
CUL3-211ENST00000487558 EML6Q6ZMW3 1958 aa2.21□□□□□ -2.05
CUL3-211ENST00000487558 CAMSAP2Q08AD1 1489 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 MYH7P12883 1935 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 TRBV6-5A0A0K0K1A5 114 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 POLR2HP52434 150 aaKnown RBP2.21□□□□□ -2.06
CUL3-211ENST00000487558 CD109Q6YHK3 1445 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 ZNF826PQ6ZT77 177 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 EXOC3-AS1Q8N2X6 119 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 Q96M85 177 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 RTL8AQ9BWD3 113 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 BICRAQ9NZM4 1560 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 HSPB8Q9UJY1 196 aa2.21□□□□□ -2.06
CUL3-211ENST00000487558 ANKRD31Q8N7Z5 1873 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 TECPR2O15040 1411 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 A0A087X0T9 212 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 K7EP13 123 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 CYB5BO43169 146 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 BCL2P10415 239 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 CRYGAP11844 174 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 RPL7P18124 248 aaKnown RBP2.2□□□□□ -2.06
CUL3-211ENST00000487558 SPANXN5Q5MJ07 72 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 LCA10Q71F78 164 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 IFT20Q8IY31 132 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 OR8I2Q8N0Y5 310 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 LRRC18Q8N456 261 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 CANT1Q8WVQ1 401 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 PCTPQ9UKL6 214 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 MDC1Q14676 2089 aaKnown RBP2.2□□□□□ -2.06
CUL3-211ENST00000487558 OBSL1O75147 1896 aa2.2□□□□□ -2.06
CUL3-211ENST00000487558 A0A087WX48 190 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 C1orf196B1AJZ1 125 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 SHBGP04278 402 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 MPC1LP0DKB6 136 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 RPS3P23396 243 aaKnown RBP eCLIP2.19□□□□□ -2.06
CUL3-211ENST00000487558 CMPK1P30085 196 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 PSG9Q00887 426 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 BCL2L15Q5TBC7 163 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 FKBP1CQ5VVH2 108 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 Q6ZQT0 140 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 TMEM229BQ8NBD8 167 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 OR52R1Q8NGF1 315 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 CACYBPQ9HB71 228 aaKnown RBP2.19□□□□□ -2.06
CUL3-211ENST00000487558 TRAPPC2LQ9UL33 140 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 MED31Q9Y3C7 131 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 SCRIBQ14160 1630 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 MED23Q9ULK4 1368 aa2.19□□□□□ -2.06
CUL3-211ENST00000487558 CCDC171Q6TFL3 1326 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms