RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 MBD3L1Q8WWY6 194 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 TRGV9Q99603 122 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 NHP2Q9NX24 153 aaKnown RBP8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 RFNGQ9Y644 331 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 ZNF646O15015 1829 aaPredicted RBP8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 CACNA1DQ01668 2161 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 TUBGCP6Q96RT7 1819 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 PRTN3P24158 256 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 DEFB131AP59861 70 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 RASL11AQ6T310 242 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 FLVCR1-AS1Q8TAF5 88 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 TSKUQ8WUA8 353 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 MYOFQ9NZM1 2061 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 ZNF561-AS1K7EIQ3 104 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 Q0VFX4 171 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 IFI27L1Q96BM0 104 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 SMPXQ9UHP9 88 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 A0A087WWC5 75 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 KLF17Q5JT82 389 aaPredicted RBP8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 NABP1Q96AH0 204 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 SCRT1Q9BWW7 348 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
SRGAP3-207ENST00000485983 CADP27708 2225 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 MPTX1A8MV57 137 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 APOC4P55056 127 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 C21orf62-AS1Q17RA5 79 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 TMEM249Q2WGJ8 235 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 EP400Q96L91 3159 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 SIPA1L1O43166 1804 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 C1QTNF9P0C862 333 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 CR1LQ2VPA4 569 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 RMI2Q96E14 147 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 A6NNC1 897 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 LINC01619G3V211 115 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 OVOL3O00110 214 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 ID3Q02535 119 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 CA1P00915 261 aaPredicted RBP8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 IGHG3P01860 377 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 CD177Q8N6Q3 437 aa8.66□□□□□ -1.02
SRGAP3-207ENST00000485983 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 SIGLEC9Q9Y336 463 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 LSM4Q9Y4Z0 139 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 SCN10AQ9Y5Y9 1956 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 H0YJW9 148 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 LY6HO94772 140 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 ZNF474Q6S9Z5 364 aaPredicted RBP8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 NIT1Q86X76 327 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 PAQR4Q8N4S7 273 aaPredicted RBP8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 GAFA1Q96PS6 74 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 RBBP6Q7Z6E9 1792 aaKnown RBP8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 PIKFYVEQ9Y2I7 2098 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 EXOC3-AS1Q8N2X6 119 aa8.65□□□□□ -1.02
SRGAP3-207ENST00000485983 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 CHCHD1Q96BP2 118 aaKnown RBP8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 DMRT1Q9Y5R6 373 aa8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 MAPK1IP1LQ8NDC0 245 aa8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 MESP1Q9BRJ9 268 aa8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 ZNF319Q9P2F9 582 aa8.65□□□□□ -1.03
SRGAP3-207ENST00000485983 SERF1AO75920 110 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 NCOR1O75376 2440 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 SHISA3A0PJX4 238 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 E7EQL1 145 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 MST1P26927 711 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 UBE2E1P51965 193 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 C17orf82Q86X59 251 aaPredicted RBP8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 GOLGB1Q14789 3259 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 H3BUT2 72 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 LHBP01229 141 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 LURAP1LQ8IV03 231 aa8.64□□□□□ -1.03
SRGAP3-207ENST00000485983 J3QLI3 93 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 CARHSP1Q9Y2V2 147 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 MTCL1Q9Y4B5 1905 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 FOXL1Q12952 345 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 XCL2Q9UBD3 114 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 PARP14Q460N5 1801 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 LEPROTO15243 131 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 IGHV1-69P01742 117 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 NPC2P61916 151 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 MST1LQ2TV78 715 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 GGTLC1Q9BX51 225 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 GNB1LQ9BYB4 327 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 TRAV8-4A0A0B4J246 113 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 IGKV1-12A0A0C4DH73 117 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 IGKV1D-12P01611 117 aa8.63□□□□□ -1.03
SRGAP3-207ENST00000485983 SUPT4H1P63272 117 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms